ENSGALG00000014258


Gallus gallus

Features
Gene ID: ENSGALG00000014258
  
Biological name :LIMCH1
  
Synonyms : LIM and calponin homology domains 1 / LIMCH1
  
Possible biological names infered from orthology : LIM and calponin homology domains-containing protein 1 / Q3UH68 / Q9UPQ0
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 68881857
Gene end: 68944854
  
Corresponding Affymetrix probe sets: Gga.12153.1.S1_s_at (Chicken Array)   GgaAffx.9048.1.S1_at (Chicken Array)   GgaAffx.9048.2.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000055314
Ensembl peptide - ENSGALP00000023016
NCBI entrez gene - 422780     See in Manteia.
RefSeq - XM_015285469
RefSeq - XM_015285467
RefSeq - XM_015285468
RefSeq - XM_004936081
RefSeq - XM_015285462
RefSeq - XM_015285463
RefSeq - XM_015285464
RefSeq - XM_015285465
swissprot - F1NIU4
swissprot - A0A1D5PQZ3
Ensembl - ENSGALG00000014258
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 limch1aENSDARG00000074275Danio rerio
 limch1bENSDARG00000103774Danio rerio
 LIMCH1ENSG00000064042Homo sapiens
 Limch1ENSMUSG00000037736Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LMO7 / LIM domain 7 / Q8WWI1* / Mus musculus LIM domain only 7 (Lmo7), transcript variant 2, mRNA.*ENSGALG0000001692020


Protein motifs (from Interpro)
Interpro ID Name
 IPR001781  Zinc finger, LIM-type
 IPR029980  LIM and calponin homology domains-containing protein 1
 IPR031865  Domain of unknown function DUF4757


Gene Ontology (GO)
TypeGO IDTermEv.Code
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr