ENSG00000137075


Homo sapiens

Features
Gene ID: ENSG00000137075
  
Biological name :RNF38
  
Synonyms : Q9H0F5 / ring finger protein 38 / RNF38
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 9
Strand: -1
Band: p13.2
Gene start: 36336396
Gene end: 36487548
  
Corresponding Affymetrix probe sets: 218528_s_at (Human Genome U133 Plus 2.0 Array)   222660_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000483536
Ensembl peptide - ENSP00000259605
Ensembl peptide - ENSP00000335239
Ensembl peptide - ENSP00000343947
Ensembl peptide - ENSP00000349566
Ensembl peptide - ENSP00000367109
Ensembl peptide - ENSP00000367117
NCBI entrez gene - 152006     See in Manteia.
OMIM - 612488
RefSeq - XM_017014297
RefSeq - NM_022781
RefSeq - NM_194328
RefSeq - NM_194329
RefSeq - NM_194330
RefSeq - NM_194332
RefSeq - XM_006716721
RefSeq - XM_011517712
RefSeq - XM_011517713
RefSeq - XM_017014294
RefSeq - XM_017014295
RefSeq - XM_017014296
RefSeq - XM_005251366
RefSeq - XM_005251367
RefSeq - XM_005251368
RefSeq Peptide - NP_919309
RefSeq Peptide - NP_919310
RefSeq Peptide - NP_919311
RefSeq Peptide - NP_919313
RefSeq Peptide - NP_073618
swissprot - Q9H0F5
Ensembl - ENSG00000137075
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rnf38ENSDARG00000062055Danio rerio
 RNF38ENSGALG00000015311Gallus gallus
 Rnf38ENSMUSG00000035696Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
RNF44 / Q7L0R7 / ring finger protein 44ENSG0000014608351
RNF6 / Q9Y252 / ring finger protein 6ENSG0000012787019
RLIM / Q9NVW2 / ring finger protein, LIM domain interactingENSG0000013126318


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008584 male gonad development IEA
 biological_processGO:0016567 protein ubiquitination IDA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IBA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0036126 sperm flagellum IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IDA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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