ENSG00000140563


Homo sapiens

Features
Gene ID: ENSG00000140563
  
Biological name :MCTP2
  
Synonyms : MCTP2 / multiple C2 and transmembrane domain containing 2 / Q6DN12
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 15
Strand: 1
Band: q26.2
Gene start: 94231538
Gene end: 94483952
  
Corresponding Affymetrix probe sets: 1554833_at (Human Genome U133 Plus 2.0 Array)   220603_s_at (Human Genome U133 Plus 2.0 Array)   229005_at (Human Genome U133 Plus 2.0 Array)   229021_at (Human Genome U133 Plus 2.0 Array)   243109_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000388887
Ensembl peptide - ENSP00000438521
Ensembl peptide - ENSP00000454847
Ensembl peptide - ENSP00000350377
Ensembl peptide - ENSP00000395109
NCBI entrez gene - 55784     See in Manteia.
OMIM - 616297
RefSeq - XM_017022405
RefSeq - NM_001159643
RefSeq - NM_001159644
RefSeq - NM_018349
RefSeq - XM_011521773
RefSeq - XM_011521774
RefSeq - XM_011521775
RefSeq - XM_017022403
RefSeq - XM_017022404
RefSeq - XM_005254955
RefSeq - XM_005254960
RefSeq - XM_006720603
RefSeq - XM_011521770
RefSeq - XM_011521771
RefSeq - XM_011521772
RefSeq Peptide - NP_001153115
RefSeq Peptide - NP_001153116
RefSeq Peptide - NP_060819
swissprot - Q6DN12
swissprot - F5H415
Ensembl - ENSG00000140563
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mctp2aENSDARG00000001414Danio rerio
 mctp2bENSDARG00000073970Danio rerio
 MCTP2ENSGALG00000030157Gallus gallus
 Mctp2ENSMUSG00000032776Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MCTP1 / Q6DN14 / multiple C2 and transmembrane domain containing 1ENSG0000017547147
ESYT1 / Q9BSJ8 / extended synaptotagmin 1ENSG0000013964116
ESYT3 / A0FGR9 / extended synaptotagmin 3ENSG0000015822014
ESYT2 / A0FGR8 / extended synaptotagmin 2ENSG0000011786814


Protein motifs (from Interpro)
Interpro ID Name
 IPR000008  C2 domain
 IPR013583  Phosphoribosyltransferase C-terminal
 IPR035892  C2 domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0019722 calcium-mediated signaling NAS
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005783 endoplasmic reticulum IBA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IDA
 molecular_functionGO:0005509 calcium ion binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000003 Multicystic kidney "Multicystic dysplasia of the kidney is characterized by multiple cysts of varying size in the kidney and the absence of a normal pelvocaliceal system. The condition is associated with ureteral or ureteropelvic atresia, and the affected kidney is nonfunctional." [HPO:curators]
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 HP:0000028 Cryptorchidism "Absence of one or both testes from the scrotum owing to failure of the testis or testes to descend through the inguinal canal to the testis." [HPO:curators]
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 HP:0000047 Hypospadias "Displacement of the urethral opening on the ventral (inferior) surface of the penis." [HPO:curators]
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 HP:0000054 Micropenis 
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 HP:0000164 Abnormality of the teeth "Any abnormality of the primary (deciduous) or permanent teeth." [HPO:curators]
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000219 Thin upper lip 
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000280 Coarse facial features 
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 HP:0000316 Hypertelorism 
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 HP:0000322 Short philtrum 
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 HP:0000325 Triangular facies 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000365 Hearing loss 
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000455 Broad nasal tip 
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 HP:0000476 Cystic hygroma of the neck "A cystic lymphatic lesion of the neck." [HPO:curators]
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000581 Blepharophimosis "Reduced width of the palpebral fissures." [HPO:sdoelken]
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 HP:0000582 Upslanting palpebral fissures 
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 HP:0000729 Pervasive developmental disorder 
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 HP:0000750 Impaired language development 
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 HP:0000776 Diaphragmatic hernia "Diaphragmatic hernia is the result of a developmental defect causing an abnormal opening in the diaphragm, through which abdominal organs (stomach, spleen, liver, and intestines) can protrude into the thoracic cavity. This usually causes respiratory distress in the newborn period." [HPO:curators]
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 HP:0000954 Transverse palmar creases "The presence of a single palmar crease (instead of the two palmar creases that are typically present)." [HPO:curators]
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 HP:0001195 Single umbilical artery 
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001508 Failure to thrive 
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 HP:0001511 Intrauterine growth retardation 
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 HP:0001518 Low birth weight 
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 HP:0001643 Patent ductus arteriosus 
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 HP:0001647 Bicuspid aortic valve "The presence of a bicuspid `aortic valve` (FMA:7236)." [HPO:probinson]
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 HP:0001671 Abnormality of the cardiac septa 
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 HP:0001680 Coarctation of aorta "Coarctation of the aorta is a narrowing or constriction of the aorta just distal to the origin of the left subclavian artery." [HPO:curators]
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 HP:0001718 Mitral stenosis 
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 HP:0001762 Talipes equinovarus "Also called clubfoot typically has 4 main components: inversion and adduction of the forefoot; inversion of the heel and hindfoot; equinus (limitation of extension) of the ankle and subtalar joint; and internal rotation of the leg. Clubfoot is a complex, multifactorial deformity with genetic and intrauterine factors. One popular theory postulates that a clubfoot is a result of intrauterine maldevelopment of the talus that leads to adduction and plantarflexion of the foot. On radiographic projection a clubfoot can be noted as parallel axes of talus and calcaneus." [HPO:curators]
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 HP:0001792 Nail hypoplasia "Underdeveloped `fingernails` (FMA:54327) or `toenails` (FMA:54328)." [HPO:probinson]
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 HP:0002089 Pulmonary hypoplasia 
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 HP:0002761 Generalized joint laxity "Joint hypermobility (ability of a joint to move beyond its normal range of motion) affecting many or all joints of the body." [HPO:curators]
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 HP:0002827 Dislocated hips 
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 HP:0002857 Genu valgum 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004383 Hypoplastic left heart 
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 HP:0004471 Aplasia cutis congenita over the scalp vertex "A developmental defect resulting in the congenital absence of skin on the scalp vertex, often just lateral to the midline." [HPO:curators]
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 HP:0005469 Occipital plagiocephaly "Occipital plagiocephaly can result from fusion or sclerosis of the lambdoid suture. If unilateral, this is accompanied by unilateral occipital flattening and bulging of the ispilateral frontal bone." [HPO:curators]
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 HP:0005709 Cutaneous syndactyly of fingers 3 and 4 and toes 2 and 3 
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 HP:0007018 Attention deficit hyperactivity disorder "Attention deficit hyperactivity disorder (ADHD) manifests at age 2-3 years or by first grade at the latest. The main symptoms are distractibility, impulsivity, hyperactivity, and often trouble organizing tasks and projects, difficulty going to sleep, and social problems from being aggressive, loud, or impatient." [HPO:curators]
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 HP:0008897 Growth retardation, progressive 
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 HP:0009882 Hypoplasia of the distal phalanges of the hand 
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 HP:0010297 Bifid tongue "Tongue with a median apical indentation or fork." [pmid:19125428]
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 HP:0011560 Mitral atresia "A congenital defect with failure to open of the mitral valve orifice." [DDD:dbrown]
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 HP:0011651 Double outlet right ventricle with doubly committed ventricular septal defect and pulmonary stenosis 
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 HP:0012303 Abnormality of the aortic arch "An anomaly of the `arch of aorta`(FMA:3768)." [HPO:probinson]
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 HP:0030353 Decreased serum insulin-like growth factor 1 "A reduced level of insulin-like growth factor 1 (IGF1) in the blood circulation." [HPO:probinson]
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 HP:0030918 Low 1-minute APGAR score 
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 HP:0040019 Finger clinodactyly 
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 HP:0100542 Abnormal localization of kidneys 
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 HP:0200055 Small hands 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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