ENSG00000141258


Homo sapiens

Features
Gene ID: ENSG00000141258
  
Biological name :SGSM2
  
Synonyms : O43147 / SGSM2 / small G protein signaling modulator 2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: 1
Band: p13.3
Gene start: 2337498
Gene end: 2381058
  
Corresponding Affymetrix probe sets: 212319_at (Human Genome U133 Plus 2.0 Array)   217538_at (Human Genome U133 Plus 2.0 Array)   36129_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000476637
Ensembl peptide - ENSP00000464593
Ensembl peptide - ENSP00000476800
Ensembl peptide - ENSP00000268989
Ensembl peptide - ENSP00000415107
Ensembl peptide - ENSP00000459126
Ensembl peptide - ENSP00000459218
Ensembl peptide - ENSP00000460205
Ensembl peptide - ENSP00000461820
NCBI entrez gene - 9905     See in Manteia.
OMIM - 611418
RefSeq - XM_017025476
RefSeq - NM_014853
RefSeq - XM_011524101
RefSeq - XM_011524102
RefSeq - XM_011524103
RefSeq - XM_011524104
RefSeq - XM_011524105
RefSeq - XM_011524106
RefSeq - XM_011524107
RefSeq - XM_011524108
RefSeq - XM_017025474
RefSeq - XM_017025475
RefSeq - NM_001098509
RefSeq Peptide - NP_055668
RefSeq Peptide - NP_001091979
RefSeq Peptide - NP_001333629
swissprot - J3QSA2
swissprot - V9GYJ0
swissprot - B9A6J3
swissprot - O43147
swissprot - I3L1Y7
swissprot - V9GYD2
swissprot - I3L361
swissprot - I3NI18
Ensembl - ENSG00000141258
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sgsm2ENSDARG00000063307Danio rerio
 SGSM2ENSGALG00000005737Gallus gallus
 Sgsm2ENSMUSG00000038351Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SGSM1 / Q2NKQ1 / small G protein signaling modulator 1ENSG0000016703761
Q8TC07 / TBC1D15 / TBC1 domain family member 15ENSG0000012174914
Q9HA65 / TBC1D17 / TBC1 domain family member 17ENSG0000010494614
Q3MII6 / TBC1D25 / TBC1 domain family member 25ENSG0000006835413
Q8TBP0 / TBC1D16 / TBC1 domain family member 16ENSG0000016729113


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR004012  RUN domain
 IPR035969  Rab-GTPase-TBC domain superfamily
 IPR037213  RUN domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0034499 late endosome to Golgi transport IMP
 biological_processGO:0043547 positive regulation of GTPase activity IMP
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0012505 endomembrane system IBA
 cellular_componentGO:0042470 melanosome IEA
 molecular_functionGO:0005096 GTPase activator activity IMP
 molecular_functionGO:0017137 Rab GTPase binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr