ENSG00000167037


Homo sapiens

Features
Gene ID: ENSG00000167037
  
Biological name :SGSM1
  
Synonyms : Q2NKQ1 / SGSM1 / small G protein signaling modulator 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 22
Strand: 1
Band: q11.23
Gene start: 24806169
Gene end: 24927578
  
Corresponding Affymetrix probe sets: 1562239_at (Human Genome U133 Plus 2.0 Array)   230287_at (Human Genome U133 Plus 2.0 Array)   242921_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000484682
Ensembl peptide - ENSP00000383211
Ensembl peptide - ENSP00000383212
NCBI entrez gene - 129049     See in Manteia.
OMIM - 611417
RefSeq - NM_001098497
RefSeq - NM_001039948
RefSeq - NM_001098498
RefSeq - NM_133454
RefSeq Peptide - NP_001035037
RefSeq Peptide - NP_001091967
RefSeq Peptide - NP_001091968
RefSeq Peptide - NP_597711
swissprot - Q2NKQ1
swissprot - A0A087X241
Ensembl - ENSG00000167037
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sgsm1aENSDARG00000028857Danio rerio
 sgsm1bENSDARG00000075376Danio rerio
 SGSM1ENSGALG00000005379Gallus gallus
 Sgsm1ENSMUSG00000042216Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SGSM2 / O43147 / small G protein signaling modulator 2ENSG0000014125856
Q8TBP0 / TBC1D16 / TBC1 domain family member 16ENSG0000016729112
Q3MII6 / TBC1D25 / TBC1 domain family member 25ENSG0000006835412
Q8TC07 / TBC1D15 / TBC1 domain family member 15ENSG0000012174912
Q9HA65 / TBC1D17 / TBC1 domain family member 17ENSG0000010494612


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR004012  RUN domain
 IPR035969  Rab-GTPase-TBC domain superfamily
 IPR037213  RUN domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005737 cytoplasm ISS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0012505 endomembrane system IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030659 cytoplasmic vesicle membrane ISS
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 molecular_functionGO:0005096 GTPase activator activity IEA
 molecular_functionGO:0017137 Rab GTPase binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr