ENSGALG00000005379


Gallus gallus

Features
Gene ID: ENSGALG00000005379
  
Biological name :SGSM1
  
Synonyms : SGSM1 / small G protein signaling modulator 1
  
Possible biological names infered from orthology : Q2NKQ1 / Q8BPQ7
  
Species: Gallus gallus
  
Chr. number: 15
Strand: 1
Band:
Gene start: 6959394
Gene end: 6984189
  
Corresponding Affymetrix probe sets: GgaAffx.11359.5.S1_s_at (Chicken Array)   GgaAffx.11359.7.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000057088
Ensembl peptide - ENSGALP00000008628
NCBI entrez gene - 430664     See in Manteia.
RefSeq - XM_015275501
RefSeq - XM_015275499
RefSeq - XM_015275500
RefSeq - XM_015275496
RefSeq - XM_015275497
RefSeq - XM_015275498
swissprot - F1NXW4
swissprot - A0A1D5PVW0
Ensembl - ENSGALG00000005379
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sgsm1aENSDARG00000028857Danio rerio
 sgsm1bENSDARG00000075376Danio rerio
 SGSM1ENSG00000167037Homo sapiens
 Sgsm1ENSMUSG00000042216Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
SGSM2 / small G protein signaling modulator 2 / O43147* / Q80U12*ENSGALG0000000573758
TBC1D15 / TBC1 domain family member 15 / Q8TC07* / Q9CXF4*ENSGALG0000001019012
TBC1D16 / TBC1 domain family member 16 / Q8TBP0* / Mus musculus TBC1 domain family, member 16 (Tbc1d16), transcript variant 2, mRNA.*ENSGALG0000000705412


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain
 IPR004012  RUN domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0012505 endomembrane system IBA
 cellular_componentGO:0030659 cytoplasmic vesicle membrane IEA
 molecular_functionGO:0005096 GTPase activator activity IEA
 molecular_functionGO:0017137 Rab GTPase binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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