ENSGALG00000007054


Gallus gallus

Features
Gene ID: ENSGALG00000007054
  
Biological name :TBC1D16
  
Synonyms : TBC1D16 / TBC1 domain family member 16
  
Possible biological names infered from orthology : Mus musculus TBC1 domain family, member 16 (Tbc1d16), transcript variant 2, mRNA. / Q8TBP0
  
Species: Gallus gallus
  
Chr. number: 18
Strand: 1
Band:
Gene start: 9658279
Gene end: 9679526
  
Corresponding Affymetrix probe sets: Gga.7470.1.S1_at (Chicken Array)   Gga.7470.2.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000011413
Ensembl peptide - ENSGALP00000053280
Ensembl peptide - ENSGALP00000051249
NCBI entrez gene - 768712     See in Manteia.
RefSeq - XM_015295607
RefSeq - XM_015295604
RefSeq - XM_015295605
RefSeq - XM_015295606
RefSeq - XM_001231438
RefSeq - XM_004946284
RefSeq - XM_004946285
RefSeq - XM_004946286
RefSeq - XM_015295603
swissprot - E1C7Q8
swissprot - A0A1D5PKC3
swissprot - A0A1D5PEP3
Ensembl - ENSGALG00000007054
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tbc1d16ENSDARG00000036994Danio rerio
 Q8TBP0ENSG00000167291Homo sapiens
 Tbc1d16ENSMUSG00000039976Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TBC1D15 / TBC1 domain family member 15 / Q8TC07* / Q9CXF4*ENSGALG0000001019020
SGSM1 / small G protein signaling modulator 1 / Q2NKQ1* / Q8BPQ7*ENSGALG0000000537918
SGSM2 / small G protein signaling modulator 2 / O43147* / Q80U12*ENSGALG0000000573717


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001919 regulation of receptor recycling IEA
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0005769 early endosome IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IEA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
TBC/RABGAPs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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