ENSDARG00000036994


Danio rerio

Features
Gene ID: ENSDARG00000036994
  
Biological name :tbc1d16
  
Synonyms : tbc1d16 / TBC1 domain family, member 16
  
Possible biological names infered from orthology : Mus musculus TBC1 domain family, member 16 (Tbc1d16), transcript variant 2, mRNA. / Q8TBP0
  
Species: Danio rerio
  
Chr. number: 3
Strand: 1
Band:
Gene start: 18437397
Gene end: 18502030
  
Corresponding Affymetrix probe sets: Dr.17359.1.A1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000146417
Ensembl peptide - ENSDARP00000150892
Ensembl peptide - ENSDARP00000114150
Ensembl peptide - ENSDARP00000122393
NCBI entrez gene - 450056     See in Manteia.
swissprot - E7FE32
swissprot - F1QJX4
ZFIN ID - ZDB-GENE-041010-179
Ensembl - ENSDARG00000036994
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TBC1D16ENSGALG00000007054Gallus gallus
 Q8TBP0ENSG00000167291Homo sapiens
 Tbc1d16ENSMUSG00000039976Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
tbc1d17 / TBC1 domain family, member 17 / Q8BYH7* / Q9HA65*ENSDARG0000000592722
tbc1d15 / TBC1 domain family, member 15 / Q8TC07* / Q9CXF4*ENSDARG0000005721819
sgsm1a / small G protein signaling modulator 1a / SGSM1* / Q2NKQ1* / small G protein signaling modulator 1*ENSDARG0000002885718
sgsm2 / small G protein signaling modulator 2 / O43147* / Q80U12*ENSDARG0000006330717
sgsm1b / small G protein signaling modulator 1b / SGSM1* / Q8BPQ7* / Q2NKQ1* / small G protein signaling modulator 1*ENSDARG0000007537617
tbc1d25 / TBC1 domain family, member 25 / A1A5B6* / Q3MII6*ENSDARG0000007533317
si:dkey-238d18.4ENSDARG0000008897214


Protein motifs (from Interpro)
Interpro ID Name
 IPR000195  Rab-GTPase-TBC domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006886 intracellular protein transport IBA
 biological_processGO:0031338 regulation of vesicle fusion IBA
 biological_processGO:0090630 activation of GTPase activity IBA
 cellular_componentGO:0005622 intracellular IBA
 cellular_componentGO:0012505 endomembrane system IBA
 molecular_functionGO:0005096 GTPase activator activity IBA
 molecular_functionGO:0017137 Rab GTPase binding IBA


Pathways (from Reactome)
Pathway description
TBC/RABGAPs


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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