ENSG00000143178


Homo sapiens

Features
Gene ID: ENSG00000143178
  
Biological name :TBX19
  
Synonyms : O60806 / T-box 19 / TBX19
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: q24.2
Gene start: 168281040
Gene end: 168314426
  
Corresponding Affymetrix probe sets: 206838_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000390731
Ensembl peptide - ENSP00000397540
Ensembl peptide - ENSP00000356795
NCBI entrez gene - 9095     See in Manteia.
OMIM - 604614
RefSeq - NM_005149
RefSeq Peptide - NP_005140
swissprot - O60806
swissprot - H0Y4B1
swissprot - H0Y5A7
Ensembl - ENSG00000143178
  
Related genetic diseases (OMIM): 201400 - Adrenocorticotropic hormone deficiency, 201400

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tbx19ENSDARG00000079187Danio rerio
 TBX19ENSGALG00000015244Gallus gallus
 Tbx19ENSMUSG00000026572Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TBXT / O15178 / T-box transcription factor TENSG0000016445856
MGA / Q8IWI9 / MGA, MAX dimerization proteinENSG0000017419734
TBX21 / Q9UL17 / T-box 21ENSG0000007386127
EOMES / O95936 / eomesoderminENSG0000016350827
TBR1 / Q16650 / T-box, brain 1ENSG0000013653527


Protein motifs (from Interpro)
Interpro ID Name
 IPR001699  Transcription factor, T-box
 IPR002070  Transcription factor, Brachyury
 IPR008967  p53-like transcription factor, DNA-binding
 IPR018186  Transcription factor, T-box, conserved site
 IPR036960  T-box superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II TAS
 biological_processGO:0006366 transcription by RNA polymerase II IEA
 biological_processGO:0009653 anatomical structure morphogenesis TAS
 biological_processGO:0021983 pituitary gland development IEA
 biological_processGO:0042127 regulation of cell proliferation IEA
 biological_processGO:0045165 cell fate commitment IEA
 biological_processGO:0045595 regulation of cell differentiation IEA
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding NAS
 molecular_functionGO:0001077 transcriptional activator activity, RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001158 enhancer sequence-specific DNA binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000835 Adrenal hypoplasia 
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 HP:0001998 Neonatal hypoglycemia 
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 HP:0002173 Seizures, hypoglycemic 
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 HP:0002615 Hypotension 
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 HP:0002902 Hyponatremia 
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 HP:0003162 Fasting hypoglycemia 
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 HP:0006579 Prolonged neonatal jaundice 
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 HP:0008163 Plasma cortisol low 
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 HP:0011735 Adrenocorticotropin (ACTH) deficient adrenal insufficiency "Adrenal insufficiency secondary to a defect in ACTH production." [DDD:spark]
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 HP:0011748 Adrenocorticotropic hormone deficiency "A reduced ability to secrete adrenocorticotropic hormone (ACTH), a hormone that stimulates the adrenal cortex to secrete of glucocorticoids such as cortisol." [DDD:spark]
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 HP:0012115 Hepatitis "Inflammation of the liver." [HPO:probinson]
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 HP:0012378 Fatigue "A subjective feeling of tiredness characterized by a lack of energy and motivation." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr