ENSG00000144381


Homo sapiens

Features
Gene ID: ENSG00000144381
  
Biological name :HSPD1
  
Synonyms : heat shock protein family D (Hsp60) member 1 / HSPD1 / P10809
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: -1
Band: q33.1
Gene start: 197486581
Gene end: 197516737
  
Corresponding Affymetrix probe sets: 200806_s_at (Human Genome U133 Plus 2.0 Array)   200807_s_at (Human Genome U133 Plus 2.0 Array)   241716_at (Human Genome U133 Plus 2.0 Array)   243372_at (Human Genome U133 Plus 2.0 Array)   243845_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000340019
Ensembl peptide - ENSP00000373620
Ensembl peptide - ENSP00000414446
Ensembl peptide - ENSP00000412717
Ensembl peptide - ENSP00000412227
Ensembl peptide - ENSP00000402478
Ensembl peptide - ENSP00000396460
Ensembl peptide - ENSP00000393670
Ensembl peptide - ENSP00000390404
NCBI entrez gene - 3329     See in Manteia.
OMIM - 118190
RefSeq - NM_199440
RefSeq - NM_002156
RefSeq Peptide - NP_002147
RefSeq Peptide - NP_955472
swissprot - C9JCQ4
swissprot - C9J0S9
swissprot - A0A024R3X4
swissprot - F8WBB1
swissprot - E7EXB4
swissprot - P10809
swissprot - E7ESH4
swissprot - C9JL25
swissprot - C9JL19
Ensembl - ENSG00000144381
  
Related genetic diseases (OMIM): 605280 - Spastic paraplegia 13, autosomal dominant, 605280
  612233 - Leukodystrophy, hypomyelinating, 4, 612233
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 hspd1ENSDARG00000056160Danio rerio
 HSPD1ENSGALG00000008094Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001844  Chaperonin Cpn60
 IPR002423  Chaperonin Cpn60/TCP-1 family
 IPR017998  Chaperone tailless complex polypeptide 1 (TCP-1)
 IPR018370  Chaperonin Cpn60, conserved site
 IPR027409  GroEL-like apical domain superfamily
 IPR027410  TCP-1-like chaperonin intermediate domain superfamily
 IPR027413  GroEL-like equatorial domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002368 B cell cytokine production IDA
 biological_processGO:0002755 MyD88-dependent toll-like receptor signaling pathway IDA
 biological_processGO:0002842 positive regulation of T cell mediated immune response to tumor cell IDA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II TAS
 biological_processGO:0006457 protein folding IEA
 biological_processGO:0006458 "de novo" protein folding IBA
 biological_processGO:0006919 activation of cysteine-type endopeptidase activity involved in apoptotic process IDA
 biological_processGO:0006986 response to unfolded protein IDA
 biological_processGO:0008637 apoptotic mitochondrial changes IBA
 biological_processGO:0009409 response to cold ISS
 biological_processGO:0016032 viral process IEA
 biological_processGO:0032727 positive regulation of interferon-alpha production IDA
 biological_processGO:0032729 positive regulation of interferon-gamma production ISS
 biological_processGO:0032733 positive regulation of interleukin-10 production IDA
 biological_processGO:0032735 positive regulation of interleukin-12 production IDA
 biological_processGO:0032755 positive regulation of interleukin-6 production IDA
 biological_processGO:0042026 protein refolding IDA
 biological_processGO:0042100 B cell proliferation IDA
 biological_processGO:0042110 T cell activation IDA
 biological_processGO:0042113 B cell activation IDA
 biological_processGO:0043032 positive regulation of macrophage activation IDA
 biological_processGO:0043065 positive regulation of apoptotic process IMP
 biological_processGO:0043066 negative regulation of apoptotic process IMP
 biological_processGO:0045041 protein import into mitochondrial intermembrane space IBA
 biological_processGO:0048291 isotype switching to IgG isotypes IDA
 biological_processGO:0050821 protein stabilization IMP
 biological_processGO:0050870 positive regulation of T cell activation ISS
 biological_processGO:0051131 chaperone-mediated protein complex assembly ISS
 biological_processGO:0051604 protein maturation ISS
 biological_processGO:0051702 interaction with symbiont IMP
 biological_processGO:0061077 chaperone-mediated protein folding IBA
 cellular_componentGO:0005615 extracellular space IDA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005743 mitochondrial inner membrane ISS
 cellular_componentGO:0005759 mitochondrial matrix IDA
 cellular_componentGO:0005769 early endosome IDA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0005905 clathrin-coated pit IDA
 cellular_componentGO:0009986 cell surface IDA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0019907 cyclin-dependent protein kinase activating kinase holoenzyme complex IDA
 cellular_componentGO:0030135 coated vesicle IDA
 cellular_componentGO:0030141 secretory granule ISS
 cellular_componentGO:0032991 protein-containing complex IDA
 cellular_componentGO:0046696 lipopolysaccharide receptor complex IDA
 cellular_componentGO:0070062 extracellular exosome IDA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0001530 lipopolysaccharide binding IDA
 molecular_functionGO:0002039 p53 binding IPI
 molecular_functionGO:0003688 DNA replication origin binding ISS
 molecular_functionGO:0003697 single-stranded DNA binding ISS
 molecular_functionGO:0003723 RNA binding HDA
 molecular_functionGO:0003725 double-stranded RNA binding IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0008035 high-density lipoprotein particle binding IDA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016887 ATPase activity ISS
 molecular_functionGO:0019899 enzyme binding IPI
 molecular_functionGO:0031625 ubiquitin protein ligase binding IPI
 molecular_functionGO:0034185 apolipoprotein binding IPI
 molecular_functionGO:0034186 apolipoprotein A-I binding IPI
 molecular_functionGO:0044183 protein binding involved in protein folding IBA
 molecular_functionGO:0051082 unfolded protein binding ISS
 molecular_functionGO:0051087 chaperone binding IPI


Pathways (from Reactome)
Pathway description
Mitochondrial protein import
TFAP2A acts as a transcriptional repressor during retinoic acid induced cell differentiation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000012 Urinary urgency 
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 HP:0000020 Urinary incontinence "Loss of the ability to control the urinary bladder leading to involuntary urination." [HPO:sdoelken]
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 HP:0000365 Hearing loss 
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 HP:0000486 Strabismus "Strabismus (also known as squint) is a condition in which the eyes are not properly aligned with each other." [HPO:curators]
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 HP:0000510 Retinitis pigmentosa "Hereditary degeneration and atrophy of the retina." [HPO:curators]
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001252 Muscular hypotonia "Muscular hypotonia is an abnormally low muscle tone (the amount of tension or resistance to movement in a muscle), often involving reduced muscle strength. Hypotonia is characterized by a diminished resistance to passive stretching." [HPO:curators]
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 HP:0001258 Spastic paraplegia 
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001266 Choreoathetosis 
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001371 Contractures 
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 HP:0001761 Pes cavus 
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 HP:0002061 Lower limb spasticity 
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 HP:0002064 Spastic gait 
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 HP:0002104 Apnea "Lack of breathing with no movement of the respiratory muscles and no exchange of air in the lungs. This term refers to a disposition to have recurrent episodes of apnea rather than to a single event." [HPO:curators]
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 HP:0002166 Decreased vibratory sense in the lower limbs "A decrease in the ability to perceive vibration in the legs." [HPO:curators]
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 HP:0002187 Mental retardation, profound "Severe mental retardation is defined as an intelligence quotient (IQ) below 20." [HPO:curators]
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 HP:0002191 Spasticity, progressive 
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 HP:0002415 Leukodystrophy 
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0002839 Sphincter disturbances (bladder) 
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 HP:0003487 Babinski sign "Upturning of the big toe (and sometimes fanning of the other toes) in response to stimulation of the sole of the foot. If the Babinski sign is present it can indicate damage to the corticospinal tract." [HPO:curators]
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 HP:0003623 Onset in neonatal period 
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 HP:0003676 Progressive disorder 
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 HP:0005484 Microcephaly, postnatal 
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 HP:0007340 Lower limb muscle weakness "Weakness of the muscles of the legs." [HPO:curators]
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 HP:0007350 Hyperreflexia in upper limbs 
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 HP:0008872 Feeding problems in infancy 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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