ENSDARG00000056160


Danio rerio

Features
Gene ID: ENSDARG00000056160
  
Biological name :hspd1
  
Synonyms : heat shock 60 protein 1 / hspd1
  
Possible biological names infered from orthology : heat shock protein 1 (chaperonin) / heat shock protein family D (Hsp60) member 1 / P10809 / P63038
  
Species: Danio rerio
  
Chr. number: 9
Strand: -1
Band:
Gene start: 32286605
Gene end: 32300783
  
Corresponding Affymetrix probe sets: Dr.7108.1.S1_at (Zebrafish Array)   NM_181330_at (Zebrafish Genome Array with custom cdf files)   
  
Cross references: Ensembl peptide - ENSDARP00000073057
Ensembl peptide - ENSDARP00000107955
NCBI entrez gene - 282676     See in Manteia.
RefSeq - NM_181330
RefSeq Peptide - NP_851847
swissprot - Q803B0
ZFIN ID - ZDB-GENE-021206-1
Ensembl - ENSDARG00000056160
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HSPD1ENSGALG00000008094Gallus gallus
 HSPD1ENSG00000144381Homo sapiens
 Hspd1ENSMUSG00000025980Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001844  Chaperonin Cpn60
 IPR002423  Chaperonin Cpn60/TCP-1 family
 IPR018370  Chaperonin Cpn60, conserved site
 IPR027409  GroEL-like apical domain superfamily
 IPR027413  GroEL-like equatorial domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001817 regulation of cytokine production IBA
 biological_processGO:0006457 protein folding IEA
 biological_processGO:0006458 "de novo" protein folding IBA
 biological_processGO:0008637 apoptotic mitochondrial changes IBA
 biological_processGO:0031101 fin regeneration IMP
 biological_processGO:0042026 protein refolding IEA
 biological_processGO:0042110 T cell activation IBA
 biological_processGO:0042246 tissue regeneration IMP
 biological_processGO:0045041 protein import into mitochondrial intermembrane space IBA
 biological_processGO:0061077 chaperone-mediated protein folding IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005759 mitochondrial matrix IDA
 cellular_componentGO:0005829 cytosol IBA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0044183 protein binding involved in protein folding IBA
 molecular_functionGO:0051082 unfolded protein binding IBA


Pathways (from Reactome)
Pathway description
Mitochondrial protein import


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0001270 blastema blastema quality , abnormal
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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