ENSG00000154485


Homo sapiens

Features
Gene ID: ENSG00000154485
  
Biological name :MMP21
  
Synonyms : matrix metallopeptidase 21 / MMP21 / Q8N119
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 10
Strand: -1
Band: q26.2
Gene start: 125766453
Gene end: 125775821
  
Corresponding Affymetrix probe sets: 1552592_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000357798
NCBI entrez gene - 118856     See in Manteia.
OMIM - 608416
RefSeq - NM_147191
RefSeq Peptide - NP_671724
swissprot - Q8N119
Ensembl - ENSG00000154485
  
Related genetic diseases (OMIM): 616749 - Heterotaxy, visceral, 7, autosomal, 616749
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mmp21ENSDARG00000112495Danio rerio
 Mmp21ENSMUSG00000030981Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MMP19 / Q99542 / matrix metallopeptidase 19ENSG0000012334225
MMP28 / Q9H239 / matrix metallopeptidase 28ENSG0000027144724
MMP2 / P08253 / matrix metallopeptidase 2ENSG0000008724524
MMP9 / P14780 / matrix metallopeptidase 9ENSG0000010098523
MMP23B / O75900 / matrix metallopeptidase 23BENSG0000018940915
MMP26 / Q9NRE1 / matrix metallopeptidase 26ENSG0000016734611
Q96BH3 / ELSPBP1 / epididymal sperm binding protein 1ENSG000001693932


Protein motifs (from Interpro)
Interpro ID Name
 IPR000585  Hemopexin-like domain
 IPR001818  Peptidase M10, metallopeptidase
 IPR002477  Peptidoglycan binding-like
 IPR006026  Peptidase, metallopeptidase
 IPR018487  Hemopexin-like repeats
 IPR021190  Peptidase M10A
 IPR024079  Metallopeptidase, catalytic domain superfamily
 IPR033739  Peptidase M10A, catalytic domain
 IPR036365  PGBD-like superfamily
 IPR036375  Hemopexin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002244 hematopoietic progenitor cell differentiation IEA
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0007368 determination of left/right symmetry IEA
 biological_processGO:0060976 coronary vasculature development IEA
 biological_processGO:0061371 determination of heart left/right asymmetry IEA
 cellular_componentGO:0005576 extracellular region IEA
 cellular_componentGO:0031012 extracellular matrix IEA
 molecular_functionGO:0004222 metalloendopeptidase activity IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008237 metallopeptidase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
Show

 HP:0001631 Atrial septal defect "Atrial septal defect (ASD) is a congenital heart defect that enables blood flow between the left and right atria via the interatrial septum. The three common types of ASD are sinus venosus defects, ostium secundum defects, and ostium primum defects." [HPO:curators]
Show

 HP:0001646 Abnormality of the aortic valve "Any abnormality of the `aortic valve` (FMA:7236)." [HPO:curators]
Show

 HP:0001669 Transposition of the great vessels 
Show

 HP:0001696 Situs inversus "A left-right reversal (or "mirror reflection") of the anatomical location of the major thoracic and abdominal organs." [HPO:curators]
Show

 HP:0001702 Abnormality of the tricuspid valve "An abnormality of the `tricuspid valve` (FMA:7234)." [HPO:probinson]
Show

 HP:0001748 Polysplenia "Polysplenia is a congenital disease manifested by multiple small accessory spleens." [HPO:curators]
Show

 HP:0002566 Intestinal malrotation "An abnormality of the intestinal rotation and fixation that normally occurs during the development of the gut. This can lead to volvulus, or twisting of the intestine that causes obstruction and necrosis." [HPO:curators]
Show

 HP:0004762 Hypoplasia of right ventricle 
Show

 HP:0004935 Pulmonary artery atresia 
Show

 HP:0004971 pulmonary artery hypoplasia 
Show

 HP:0005160 Total anomalous pulmonary venous return "Total anomalous pulmonary venous return refers to a congenital malformation in which all four pulmonary veins do not connect normally to the left atrium, but instead drain abnormally to the right atrium." [HPO:curators]
Show

 HP:0006695 Tricuspid and mitral valves are replaced by a single inlet valve 
Show

 HP:0011560 Mitral atresia "A congenital defect with failure to open of the mitral valve orifice." [DDD:dbrown]
Show

 HP:0011565 Common atrium "Complete absence of the interatrial septum with common atrioventricular valve and two atrioventricular connections." [DDD:dbrown, HPO:probinson]
Show

 HP:0011611 Interrupted aortic arch "Non-continuity of the aortic arch with an atretic point or absent segment." [DDD:dbrown]
Show

 HP:0011671 Interrupted inferior vena cava with azygous continuation "Interrupted inferior vena cava with azygous continuation is the result of connection failure between the right subcardinal vein and the right vitelline vein. Consequently, venous blood from the caudal part of the body reaches the heart via the azygous vein and superior vena cava." [DDD:dbrown, pmid:10550884]
Show

 HP:0012020 Right aortic arch "Aorta descends on right instead of on the left." [HPO:probinson]
Show

 HP:0030853 Heterotaxy "An abnormality in which the internal thoraco-abdominal organs demonstrate abnormal arrangement across the left-right axis of the body." [HPO:probinson]
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr