ENSG00000189409


Homo sapiens

Features
Gene ID: ENSG00000189409
  
Biological name :MMP23B
  
Synonyms : matrix metallopeptidase 23B / MMP23B / O75900
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: p36.33
Gene start: 1632095
Gene end: 1635263
  
Corresponding Affymetrix probe sets: 207118_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000424976
Ensembl peptide - ENSP00000426293
Ensembl peptide - ENSP00000462142
Ensembl peptide - ENSP00000426857
Ensembl peptide - ENSP00000348308
Ensembl peptide - ENSP00000367945
Ensembl peptide - ENSP00000405867
Ensembl peptide - ENSP00000423780
NCBI entrez gene - 8510     See in Manteia.
OMIM - 603321
RefSeq - XM_017002617
RefSeq - NM_006983
RefSeq - XM_017002615
RefSeq - XM_017002616
RefSeq Peptide - NP_008914
swissprot - J3KRS4
swissprot - D6REP6
swissprot - O75086
swissprot - O75900
swissprot - B4DMZ6
swissprot - H0Y6I4
swissprot - H0YAE5
swissprot - H0YA69
Ensembl - ENSG00000189409
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MMP23BENSDARG00000043079Danio rerio
 MMP23BENSGALG00000001392Gallus gallus
 Mmp23ENSMUSG00000029061Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MMP2 / P08253 / matrix metallopeptidase 2ENSG0000008724527
MMP19 / Q99542 / matrix metallopeptidase 19ENSG0000012334227
MMP28 / Q9H239 / matrix metallopeptidase 28ENSG0000027144726
MMP9 / P14780 / matrix metallopeptidase 9ENSG0000010098526
MMP21 / Q8N119 / matrix metallopeptidase 21ENSG0000015448522
MMP26 / Q9NRE1 / matrix metallopeptidase 26ENSG0000016734616
Q96BH3 / ELSPBP1 / epididymal sperm binding protein 1ENSG000001693933


Protein motifs (from Interpro)
Interpro ID Name
 IPR001818  Peptidase M10, metallopeptidase
 IPR003582  ShKT domain
 IPR003599  Immunoglobulin subtype
 IPR006026  Peptidase, metallopeptidase
 IPR007110  Immunoglobulin-like domain
 IPR013783  Immunoglobulin-like fold
 IPR021190  Peptidase M10A
 IPR024079  Metallopeptidase, catalytic domain superfamily
 IPR028687  Matrix metalloproteinase-23
 IPR033739  Peptidase M10A, catalytic domain
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000003 reproduction IEP
 biological_processGO:0006508 proteolysis IEA
 cellular_componentGO:0005622 intracellular NAS
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031012 extracellular matrix IEA
 molecular_functionGO:0004222 metalloendopeptidase activity IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008237 metallopeptidase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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