ENSDARG00000043079


Danio rerio

Features
Gene ID: ENSDARG00000043079
  
Biological name :MMP23B
  
Synonyms : matrix metallopeptidase 23B / MMP23B
  
Possible biological names infered from orthology : Matrix metalloproteinase-23 Matrix metalloproteinase-23, soluble form / Mmp23 / O75900 / O88676
  
Species: Danio rerio
  
Chr. number: 8
Strand: 1
Band:
Gene start: 53928472
Gene end: 53946034
  
Corresponding Affymetrix probe sets: Dr.9539.1.S1_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000063241
NCBI entrez gene - 101882601     See in Manteia.
swissprot - E7FGL6
Ensembl - ENSDARG00000043079
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MMP23BENSGALG00000001392Gallus gallus
 MMP23BENSG00000189409Homo sapiens
 Mmp23ENSMUSG00000029061Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mmp23bb / matrix metallopeptidase 23bbENSDARG0000000982546
mmp2 / matrix metallopeptidase 2 / P08253* / P33434* / 72 kDa type IV collagenase PEX*ENSDARG0000001767625
mmp9 / matrix metallopeptidase 9 / P14780* / P41245* / Matrix metalloproteinase-9 *ENSDARG0000004281624
mmp19 / matrix metallopeptidase 19 / Q99542* / Q9JHI0* / Matrix metalloproteinase-19 *ENSDARG0000009155723
mmp28 / matrix metallopeptidase 28 / Q9H239* / matrix metallopeptidase 28 (epilysin)*ENSDARG0000005902923
mmp21 / A0A0N9E2K8 / matrix metallopeptidase 21 / Q8N119*ENSDARG0000011249520
CABZ01029422.1ENSDARG0000011643811


Protein motifs (from Interpro)
Interpro ID Name
 IPR001818  Peptidase M10, metallopeptidase
 IPR003582  ShKT domain
 IPR006026  Peptidase, metallopeptidase
 IPR007110  Immunoglobulin-like domain
 IPR013783  Immunoglobulin-like fold
 IPR021190  Peptidase M10A
 IPR024079  Metallopeptidase, catalytic domain superfamily
 IPR028687  Matrix metalloproteinase-23
 IPR033739  Peptidase M10A, catalytic domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 cellular_componentGO:0031012 extracellular matrix IEA
 molecular_functionGO:0004222 metalloendopeptidase activity IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008237 metallopeptidase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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