ENSDARG00000059029


Danio rerio

Features
Gene ID: ENSDARG00000059029
  
Biological name :mmp28
  
Synonyms : matrix metallopeptidase 28 / mmp28
  
Possible biological names infered from orthology : matrix metallopeptidase 28 (epilysin) / Q9H239
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 1778773
Gene end: 1822548
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000076463
Ensembl peptide - ENSDARP00000127669
Ensembl peptide - ENSDARP00000153136
NCBI entrez gene - 100005670     See in Manteia.
swissprot - A0A0J9YJ14
swissprot - E7F9I3
ZFIN ID - ZDB-GENE-100226-1
Ensembl - ENSDARG00000059029
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MMP28ENSGALG00000002081Gallus gallus
 MMP28ENSG00000271447Homo sapiens
 Mmp28ENSMUSG00000020682Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
mmp9 / matrix metallopeptidase 9 / P14780* / P41245* / Matrix metalloproteinase-9 *ENSDARG0000004281629
mmp19 / matrix metallopeptidase 19 / Q99542* / Q9JHI0* / Matrix metalloproteinase-19 *ENSDARG0000009155729
mmp2 / matrix metallopeptidase 2 / P08253* / P33434* / 72 kDa type IV collagenase PEX*ENSDARG0000001767628
mmp21 / A0A0N9E2K8 / matrix metallopeptidase 21 / Q8N119*ENSDARG0000011249527
mmp23bb / matrix metallopeptidase 23bbENSDARG0000000982518
MMP23B / matrix metallopeptidase 23B / O75900*ENSDARG0000004307917
CABZ01029422.1ENSDARG000001164389


Protein motifs (from Interpro)
Interpro ID Name
 IPR000585  Hemopexin-like domain
 IPR001818  Peptidase M10, metallopeptidase
 IPR002477  Peptidoglycan binding-like
 IPR006026  Peptidase, metallopeptidase
 IPR018487  Hemopexin-like repeats
 IPR021190  Peptidase M10A
 IPR024079  Metallopeptidase, catalytic domain superfamily
 IPR028735  Matrix metalloproteinase-28
 IPR033739  Peptidase M10A, catalytic domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 cellular_componentGO:0031012 extracellular matrix IEA
 molecular_functionGO:0004222 metalloendopeptidase activity IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008237 metallopeptidase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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