ENSGALG00000002081


Gallus gallus

Features
Gene ID: ENSGALG00000002081
  
Biological name :MMP28
  
Synonyms : matrix metallopeptidase 28 / MMP28
  
Possible biological names infered from orthology : matrix metallopeptidase 28 (epilysin) / Q9H239
  
Species: Gallus gallus
  
Chr. number: 19
Strand: 1
Band:
Gene start: 4342091
Gene end: 4350741
  
Corresponding Affymetrix probe sets: Gga.7934.1.S1_at (Chicken Array)   GgaAffx.1376.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000003241
NCBI entrez gene - 417523     See in Manteia.
RefSeq - XM_015296017
RefSeq - XM_415771
swissprot - F1P0N3
Ensembl - ENSGALG00000002081
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mmp28ENSDARG00000059029Danio rerio
 MMP28ENSG00000271447Homo sapiens
 Mmp28ENSMUSG00000020682Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MMP2 / Q90611 / 72 kDa type IV collagenase / P08253* / P33434* / matrix metallopeptidase 2* / 72 kDa type IV collagenase PEX*ENSGALG0000000358030
MMP9 / matrix metalloproteinase-9 precursor / P14780* / P41245* / matrix metallopeptidase 9* / Matrix metalloproteinase-9 *ENSGALG0000000699230
MMP23B / matrix metallopeptidase 23B / Mmp23* / O75900* / O88676* / Matrix metalloproteinase-23 Matrix metalloproteinase-23, soluble form*ENSGALG0000000139218


Protein motifs (from Interpro)
Interpro ID Name
 IPR000585  Hemopexin-like domain
 IPR001818  Peptidase M10, metallopeptidase
 IPR002477  Peptidoglycan binding-like
 IPR006026  Peptidase, metallopeptidase
 IPR018487  Hemopexin-like repeats
 IPR021190  Peptidase M10A
 IPR024079  Metallopeptidase, catalytic domain superfamily
 IPR028735  Matrix metalloproteinase-28


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0010760 negative regulation of macrophage chemotaxis IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0031012 extracellular matrix IEA
 molecular_functionGO:0004222 metalloendopeptidase activity IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008237 metallopeptidase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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