ENSMUSG00000029061


Mus musculus

Features
Gene ID: ENSMUSG00000029061
  
Biological name :Mmp23
  
Synonyms : Matrix metalloproteinase-23 Matrix metalloproteinase-23, soluble form / Mmp23 / O88676
  
Possible biological names infered from orthology : matrix metallopeptidase 23B / MMP23B / O75900
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: E2
Gene start: 155650655
Gene end: 155653384
  
Corresponding Affymetrix probe sets: 10519140 (MoGene1.0st)   1417281_a_at (Mouse Genome 430 2.0 Array)   1417282_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000030937
NCBI entrez gene - 26561     See in Manteia.
MGI - MGI:1347361
RefSeq - XM_006538884
RefSeq - NM_001320235
RefSeq - NM_011985
RefSeq - XM_006538880
RefSeq - XM_006538881
RefSeq - XM_006538882
RefSeq - XM_006538879
RefSeq Peptide - NP_036115
RefSeq Peptide - NP_001307164
swissprot - O88676
Ensembl - ENSMUSG00000029061
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 MMP23BENSDARG00000043079Danio rerio
 MMP23BENSGALG00000001392Gallus gallus
 MMP23BENSG00000189409Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Mmp2 / P33434 / 72 kDa type IV collagenase PEX / P08253* / matrix metallopeptidase 2*ENSMUSG0000003174026
Mmp19 / Q9JHI0 / Matrix metalloproteinase-19 / Q99542* / matrix metallopeptidase 19*ENSMUSG0000002535526
Mmp9 / P41245 / Matrix metalloproteinase-9 / P14780* / matrix metallopeptidase 9*ENSMUSG0000001773724
Mmp28 / matrix metallopeptidase 28 (epilysin) / Q9H239* / matrix metallopeptidase 28*ENSMUSG0000002068224
Mmp21 / Q8K3F2 / matrix metallopeptidase 21 / Q8N119*ENSMUSG0000003098122


Protein motifs (from Interpro)
Interpro ID Name
 IPR001818  Peptidase M10, metallopeptidase
 IPR003582  ShKT domain
 IPR006026  Peptidase, metallopeptidase
 IPR007110  Immunoglobulin-like domain
 IPR013783  Immunoglobulin-like fold
 IPR021190  Peptidase M10A
 IPR024079  Metallopeptidase, catalytic domain superfamily
 IPR028687  Matrix metalloproteinase-23
 IPR033739  Peptidase M10A, catalytic domain
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000003 reproduction IEA
 biological_processGO:0006508 proteolysis ISO
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0031012 extracellular matrix IEA
 molecular_functionGO:0004222 metalloendopeptidase activity ISO
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008237 metallopeptidase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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