ENSG00000087245


Homo sapiens

Features
Gene ID: ENSG00000087245
  
Biological name :MMP2
  
Synonyms : matrix metallopeptidase 2 / MMP2 / P08253
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: q12.2
Gene start: 55389700
Gene end: 55506691
  
Corresponding Affymetrix probe sets: 1566677_at (Human Genome U133 Plus 2.0 Array)   201069_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000461915
Ensembl peptide - ENSP00000444143
Ensembl peptide - ENSP00000394237
Ensembl peptide - ENSP00000219070
Ensembl peptide - ENSP00000457949
Ensembl peptide - ENSP00000461421
Ensembl peptide - ENSP00000456096
Ensembl peptide - ENSP00000456518
NCBI entrez gene - 4313     See in Manteia.
OMIM - 120360
RefSeq - NM_004530
RefSeq - NM_001127891
RefSeq - NM_001302508
RefSeq - NM_001302509
RefSeq - NM_001302510
RefSeq Peptide - NP_001121363
RefSeq Peptide - NP_004521
RefSeq Peptide - NP_001289439
RefSeq Peptide - NP_001289438
RefSeq Peptide - NP_001289437
swissprot - P08253
swissprot - A0A024R6R4
swissprot - H3BR66
swissprot - H3BS34
swissprot - H3BV48
swissprot - J3KRB7
Ensembl - ENSG00000087245
  
Related genetic diseases (OMIM): 259600 - Multicentric osteolysis, nodulosis, and arthropathy, 259600
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 mmp2ENSDARG00000017676Danio rerio
 MMP2ENSGALG00000003580Gallus gallus
 Mmp2ENSMUSG00000031740Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
MMP9 / P14780 / matrix metallopeptidase 9ENSG0000010098548
MMP19 / Q99542 / matrix metallopeptidase 19ENSG0000012334223
MMP21 / Q8N119 / matrix metallopeptidase 21ENSG0000015448521
MMP28 / Q9H239 / matrix metallopeptidase 28ENSG0000027144721
MMP23B / O75900 / matrix metallopeptidase 23BENSG0000018940916
MMP26 / Q9NRE1 / matrix metallopeptidase 26ENSG0000016734614
Q96BH3 / ELSPBP1 / epididymal sperm binding protein 1ENSG0000016939310


Protein motifs (from Interpro)
Interpro ID Name
 IPR000562  Fibronectin type II domain
 IPR000585  Hemopexin-like domain
 IPR001818  Peptidase M10, metallopeptidase
 IPR002477  Peptidoglycan binding-like
 IPR006026  Peptidase, metallopeptidase
 IPR013806  Kringle-like fold
 IPR018486  Hemopexin, conserved site
 IPR018487  Hemopexin-like repeats
 IPR021158  Peptidase M10A, cysteine switch, zinc binding site
 IPR021190  Peptidase M10A
 IPR024079  Metallopeptidase, catalytic domain superfamily
 IPR028708  72kDa type IV collagenase
 IPR033739  Peptidase M10A, catalytic domain
 IPR036365  PGBD-like superfamily
 IPR036366  PGBD superfamily
 IPR036375  Hemopexin-like domain superfamily
 IPR036943  Fibronectin type II domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001525 angiogenesis IEA
 biological_processGO:0001666 response to hypoxia IEA
 biological_processGO:0001955 blood vessel maturation IEA
 biological_processGO:0001957 intramembranous ossification IEA
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0007566 embryo implantation IEA
 biological_processGO:0019221 cytokine-mediated signaling pathway TAS
 biological_processGO:0022617 extracellular matrix disassembly TAS
 biological_processGO:0030574 collagen catabolic process IEA
 biological_processGO:0035987 endodermal cell differentiation IEP
 biological_processGO:0044267 cellular protein metabolic process TAS
 biological_processGO:0045089 positive regulation of innate immune response IEA
 biological_processGO:0048013 ephrin receptor signaling pathway TAS
 biological_processGO:0048705 skeletal system morphogenesis IEA
 biological_processGO:0060325 face morphogenesis IEA
 biological_processGO:0060346 bone trabecula formation IEA
 biological_processGO:0071230 cellular response to amino acid stimulus IEA
 biological_processGO:1904707 positive regulation of vascular smooth muscle cell proliferation IMP
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005615 extracellular space TAS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030017 sarcomere IEA
 cellular_componentGO:0031012 extracellular matrix IEA
 molecular_functionGO:0004222 metalloendopeptidase activity IEA
 molecular_functionGO:0004252 serine-type endopeptidase activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008237 metallopeptidase activity IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Collagen degradation
Degradation of the extracellular matrix
Activation of Matrix Metalloproteinases
Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
EPH-ephrin mediated repulsion of cells
Interleukin-4 and Interleukin-13 signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000212 Gingival hyperplasia 
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 HP:0000248 Brachycephaly "Brachycephaly refers to a short, wide head, which is often caused by premature closure of both coronal sutures." [HPO:curators]
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 HP:0000280 Coarse facial features 
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 HP:0000316 Hypertelorism 
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 HP:0000327 Hypoplasia of the maxilla "Underdevelopment of the `Maxilla` (FMA:9711)." [HPO:probinson]
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000414 Bulbous nose 
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 HP:0000446 Narrow nasal bridge 
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 HP:0000520 Proptosis 
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 HP:0000598 Abnormality of the ears 
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 HP:0000684 Delayed dentition "Delayed eruption of teeth." [HPO:curators]
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 HP:0000765 Abnormality of the thorax "Any abnormality of the thorax (the region of the body formed by the sternum, the thoracic vertebrae and the ribs)." [HPO:curators]
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 HP:0000938 Osteopenia "Osteopenia refers to a reduction in bone mineral density (BMD) below normal peak BMD but not low enough to be classified as osteoporosis. According to the WHO, osteopenia is characterized by a value of BMD more than 1 standard deviation below the young adult mean, but less than 2 standard deviations below this value." [HPO:curators]
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 HP:0000939 Osteoporosis "Osteoporosis is a systemic skeletal disease characterized by low bone density and microarchitectural deterioration of bone tissue with a consequent increase in bone fragility. According to the WHO, osteoporosis is characterized by a value of BMD 2.5 standard deviations or more below the young adult mean." [HPO:curators]
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 HP:0001007 Hirsutism "Abnormally increased hair growth." [HPO:curators]
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 HP:0001034 Hyperpigmented macules 
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 HP:0001072 Thickened skin 
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 HP:0001171 Ectrodactyly (hands) 
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 HP:0001220 Interphalangeal joint contractures 
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 HP:0001239 Wrist contractures 
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 HP:0001288 Gait disturbance "The term gait disturbance can refer to any disruption of the ability to walk. In general, this can refer to neurological diseases but also fractures or other sources of pain that is triggered upon walking. However, in the current context gait disturbance refers to difficulty walking on the basis of a neurological or muscular disease." [HPO:curators]
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 HP:0001473 Osteolysis involving metatarsal bones 
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 HP:0001476 Delayed closure of the anterior fontanelle "A delay in closure (ossification) of the anterior fontanelle, which generally undergoes closure around the 18th month of life." [HPO:curators]
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 HP:0001482 Subcutaneous nodules 
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 HP:0001495 Carpal osteolysis "Osteolysis affecting carpal bones." [HPO:curators]
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 HP:0001504 Metacarpal osteolysis 
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 HP:0001761 Pes cavus 
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 HP:0001763 Pes planus "A condition in which the arch of the foot is flat, with the entire sole of the foot being in near-complete contact with the ground." [HPO:curators]
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 HP:0001783 Broad metatarsals 
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 HP:0001836 Camptodactyly (feet) 
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 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
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 HP:0002751 Kyphoscoliosis 
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 HP:0002829 Arthralgia 
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 HP:0002953 Vertebral compression fractures 
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 HP:0003016 Metaphyseal widening "Abnormal widening of the metaphyseal regions of long bones." [HPO:curators]
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 HP:0003179 Protrusio acetabuli "Protrusion of the acetabulum, which is the socket that together with the head of the femur forms the heep joint. The protrusion is the result of increased depth of the socket and results in medial displacement of the femoral head." [HPO:curators]
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 HP:0003273 Hip contractures 
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 HP:0003320 C1-C2 subluxation "A partial dislocation of the intervertebral joint between the first and second cervical vertebrae." [HPO:curators]
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 HP:0003493 Antinuclear antibody positive 
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 HP:0003593 Early onset 
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 HP:0003621 Juvenile onset 
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0005441 Sclerotic cranial sutures "An increased density in the cranial sutures following obliteration." [HPO:curators]
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 HP:0006012 Widened metacarpal shaft 
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 HP:0006086 Thin metacarpal cortices 
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 HP:0006234 Osteolysis involving tarsal bones "An increased resorption of bone matrix by osteoclasts leading to bony defects involving the tarsal bones." [HPO:curators]
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 HP:0006252 Interphalangeal joint erosions 
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 HP:0006466 Contractures of the ankles 
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 HP:0008011 Peripheral corneal opacities 
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 HP:0008078 Thin metatarsal cortices 
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 HP:0008090 Ankylosis of feet small joints 
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 HP:0008133 Distal tapering of metatarsals 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000099769 IGFALS / P35858 / insulin like growth factor binding protein acid labile subunit  / reaction
 ENSG00000167244 IGF2 / P01344 / insulin like growth factor 2  / reaction
 ENSG00000146197 Q8IX30 / SCUBE3 / signal peptide, CUB domain and EGF like domain containing 3  / reaction
 ENSG00000035862 TIMP2 / P16035 / TIMP metallopeptidase inhibitor 2  / complex / reaction
 ENSG00000138829 FBN2 / P35556 / fibrillin 2  / reaction
 ENSG00000146674 IGFBP3 / P17936 / insulin like growth factor binding protein 3  / reaction
 ENSG00000157227 MMP14 / P50281 / matrix metallopeptidase 14  / complex / reaction
 ENSG00000017427 IGF1 / P05019 / insulin like growth factor 1  / reaction
 ENSG00000188770 OPTC / Q9UBM4 / opticin  / reaction
 ENSG00000011465 DCN / P07585 / decorin  / reaction
 ENSG00000166147 FBN1 / P35555 / fibrillin 1  / reaction
 ENSG00000026508 CD44 / P16070 / CD44 molecule (Indian blood group)  / complex / reaction
 ENSG00000137673 MMP7 / P09237 / matrix metallopeptidase 7  / reaction
 ENSG00000196611 MMP1 / P03956 / matrix metallopeptidase 1  / reaction






 

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