ENSG00000017427


Homo sapiens

Features
Gene ID: ENSG00000017427
  
Biological name :IGF1
  
Synonyms : IGF1 / insulin like growth factor 1 / P05019
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 12
Strand: -1
Band: q23.2
Gene start: 102395874
Gene end: 102481744
  
Corresponding Affymetrix probe sets: 209540_at (Human Genome U133 Plus 2.0 Array)   209541_at (Human Genome U133 Plus 2.0 Array)   209542_x_at (Human Genome U133 Plus 2.0 Array)   211577_s_at (Human Genome U133 Plus 2.0 Array)   241072_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000416811
Ensembl peptide - ENSP00000302665
Ensembl peptide - ENSP00000337612
Ensembl peptide - ENSP00000376637
Ensembl peptide - ENSP00000494228
Ensembl peptide - ENSP00000376638
NCBI entrez gene - 3479     See in Manteia.
OMIM - 147440
RefSeq - XM_017019263
RefSeq - NM_000618
RefSeq - NM_001111283
RefSeq - NM_001111284
RefSeq - NM_001111285
RefSeq - XM_017019260
RefSeq - XM_017019262
RefSeq Peptide - NP_000609
RefSeq Peptide - NP_001104753
RefSeq Peptide - NP_001104754
RefSeq Peptide - NP_001104755
swissprot - Q5U743
swissprot - P05019
swissprot - Q13429
Ensembl - ENSG00000017427
  
Related genetic diseases (OMIM): 608747 - Growth retardation with deafness and mental retardation due to IGF1 deficiency, 608747
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 igf1ENSDARG00000094132Danio rerio
 IGF-IENSGALG00000012755Gallus gallus
 Igf1ENSMUSG00000020053Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
IGF2 / P01344 / insulin like growth factor 2ENSG0000016724438


Protein motifs (from Interpro)
Interpro ID Name
 IPR016179  Insulin-like
 IPR022341  Insulin-like growth factor I
 IPR022350  Insulin-like growth factor
 IPR022352  Insulin family
 IPR022353  Insulin, conserved site
 IPR036438  Insulin-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000187 activation of MAPK activity IMP
 biological_processGO:0001501 skeletal system development TAS
 biological_processGO:0001775 cell activation IDA
 biological_processGO:0002576 platelet degranulation TAS
 biological_processGO:0006260 DNA replication TAS
 biological_processGO:0007165 signal transduction TAS
 biological_processGO:0007265 Ras protein signal transduction TAS
 biological_processGO:0007517 muscle organ development TAS
 biological_processGO:0008283 cell proliferation IMP
 biological_processGO:0008284 positive regulation of cell proliferation IMP
 biological_processGO:0009408 response to heat IDA
 biological_processGO:0009441 glycolate metabolic process TAS
 biological_processGO:0010468 regulation of gene expression IMP
 biological_processGO:0010469 regulation of signaling receptor activity IEA
 biological_processGO:0010560 positive regulation of glycoprotein biosynthetic process IMP
 biological_processGO:0010613 positive regulation of cardiac muscle hypertrophy IDA
 biological_processGO:0010628 positive regulation of gene expression IGI
 biological_processGO:0014065 phosphatidylinositol 3-kinase signaling IMP
 biological_processGO:0014068 positive regulation of phosphatidylinositol 3-kinase signaling IDA
 biological_processGO:0014834 skeletal muscle satellite cell maintenance involved in skeletal muscle regeneration IDA
 biological_processGO:0014896 muscle hypertrophy IMP
 biological_processGO:0014904 myotube cell development IDA
 biological_processGO:0014911 positive regulation of smooth muscle cell migration IDA
 biological_processGO:0030166 proteoglycan biosynthetic process IDA
 biological_processGO:0030335 positive regulation of cell migration IMP
 biological_processGO:0032148 activation of protein kinase B activity IMP
 biological_processGO:0033160 positive regulation of protein import into nucleus, translocation IDA
 biological_processGO:0034392 negative regulation of smooth muscle cell apoptotic process IDA
 biological_processGO:0035630 bone mineralization involved in bone maturation IDA
 biological_processGO:0040014 regulation of multicellular organism growth IEP
 biological_processGO:0042104 positive regulation of activated T cell proliferation IDA
 biological_processGO:0042531 positive regulation of tyrosine phosphorylation of STAT protein IDA
 biological_processGO:0043066 negative regulation of apoptotic process IMP
 biological_processGO:0043388 positive regulation of DNA binding IDA
 biological_processGO:0043410 positive regulation of MAPK cascade IDA
 biological_processGO:0043491 protein kinase B signaling IMP
 biological_processGO:0043568 positive regulation of insulin-like growth factor receptor signaling pathway IDA
 biological_processGO:0044267 cellular protein metabolic process TAS
 biological_processGO:0045445 myoblast differentiation IDA
 biological_processGO:0045669 positive regulation of osteoblast differentiation IDA
 biological_processGO:0045725 positive regulation of glycogen biosynthetic process IDA
 biological_processGO:0045740 positive regulation of DNA replication ISS
 biological_processGO:0045821 positive regulation of glycolytic process IDA
 biological_processGO:0045840 positive regulation of mitotic nuclear division IDA
 biological_processGO:0045893 positive regulation of transcription, DNA-templated IMP
 biological_processGO:0045944 positive regulation of transcription by RNA polymerase II IDA
 biological_processGO:0046326 positive regulation of glucose import IDA
 biological_processGO:0046579 positive regulation of Ras protein signal transduction IDA
 biological_processGO:0048009 insulin-like growth factor receptor signaling pathway IMP
 biological_processGO:0048015 phosphatidylinositol-mediated signaling IDA
 biological_processGO:0048146 positive regulation of fibroblast proliferation IDA
 biological_processGO:0048661 positive regulation of smooth muscle cell proliferation IDA
 biological_processGO:0050679 positive regulation of epithelial cell proliferation IDA
 biological_processGO:0050714 positive regulation of protein secretion IMP
 biological_processGO:0050731 positive regulation of peptidyl-tyrosine phosphorylation IDA
 biological_processGO:0050821 protein stabilization IMP
 biological_processGO:0051450 myoblast proliferation IDA
 biological_processGO:0060283 negative regulation of oocyte development IMP
 biological_processGO:0061051 positive regulation of cell growth involved in cardiac muscle cell development IGI
 biological_processGO:0070371 ERK1 and ERK2 cascade IMP
 biological_processGO:0070886 positive regulation of calcineurin-NFAT signaling cascade IDA
 biological_processGO:0090201 negative regulation of release of cytochrome c from mitochondria ISS
 biological_processGO:1904075 positive regulation of trophectodermal cell proliferation IMP
 biological_processGO:1904646 cellular response to amyloid-beta IGI
 biological_processGO:1904707 positive regulation of vascular smooth muscle cell proliferation IMP
 biological_processGO:1905460 negative regulation of vascular associated smooth muscle cell apoptotic process IMP
 biological_processGO:2000679 positive regulation of transcription regulatory region DNA binding IDA
 biological_processGO:2001237 negative regulation of extrinsic apoptotic signaling pathway IDA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0005615 extracellular space IDA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0016942 insulin-like growth factor binding protein complex IC
 cellular_componentGO:0031093 platelet alpha granule lumen TAS
 cellular_componentGO:0035867 alphav-beta3 integrin-IGF-1-IGF1R complex IDA
 cellular_componentGO:0042567 insulin-like growth factor ternary complex IDA
 cellular_componentGO:0070382 exocytic vesicle ISS
 molecular_functionGO:0005158 insulin receptor binding IPI
 molecular_functionGO:0005159 insulin-like growth factor receptor binding IPI
 molecular_functionGO:0005178 integrin binding IDA
 molecular_functionGO:0005179 hormone activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008083 growth factor activity IEA


Pathways (from Reactome)
Pathway description
Platelet degranulation
Signaling by Type 1 Insulin-like Growth Factor 1 Receptor (IGF1R)
IRS-related events triggered by IGF1R
SHC-related events triggered by IGF1R
Regulation of Insulin-like Growth Factor (IGF) transport and uptake by Insulin-like Growth Factor Binding Proteins (IGFBPs)
Synthesis, secretion, and deacylation of Ghrelin


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000135 Hypogonadism "Reduced function of the gonads (testes in males or ovaries in females)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000294 Low frontal hairline "A condition in which the scalp hair is present at lower than usual areas of the forehead." [HPO:curators]
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000399 Deafness, sensorineural, prelingual, profound 
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 HP:0000407 Hearing loss, sensorineural "Hearing loss caused by damage or dysfunction of the auditory nerve (cranial nerve VIII)." [HPO:curators]
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000545 Myopia 
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 HP:0000684 Delayed dentition "Delayed eruption of teeth." [HPO:curators]
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 HP:0000736 Short attention span "Reduced attention span characterized by distractibility and impulsivity but not necessarily satisfying the diagnostic criteria for attention deficit hyperactivity disorder." [HPO:curators]
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 HP:0000752 Hyperactivity 
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 HP:0000855 Insulin resistance 
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 HP:0000938 Osteopenia "Osteopenia refers to a reduction in bone mineral density (BMD) below normal peak BMD but not low enough to be classified as osteoporosis. According to the WHO, osteopenia is characterized by a value of BMD more than 1 standard deviation below the young adult mean, but less than 2 standard deviations below this value." [HPO:curators]
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 HP:0000939 Osteoporosis "Osteoporosis is a systemic skeletal disease characterized by low bone density and microarchitectural deterioration of bone tissue with a consequent increase in bone fragility. According to the WHO, osteoporosis is characterized by a value of BMD 2.5 standard deviations or more below the young adult mean." [HPO:curators]
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 HP:0000954 Transverse palmar creases "The presence of a single palmar crease (instead of the two palmar creases that are typically present)." [HPO:curators]
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 HP:0000957 Cafe-au-lait spots 
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 HP:0001249 Mental retardation 
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 HP:0001256 Mental retardation, mild "Mild mental retardation is defined as an intelligence quotient (IQ) in the range of 50-69." [HPO:curators]
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 HP:0001270 Motor retardation 
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 HP:0001508 Failure to thrive 
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 HP:0001511 Intrauterine growth retardation 
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 HP:0001518 Low birth weight 
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 HP:0001939 Metabolism abnormality 
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 HP:0001943 Hypoglycemia "A lower than normal level of blood glucose." [HPO:curators]
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 HP:0001956 Truncal obesity "Obesity located preferentially in the trunk of the body as opposed to the extremities." [HPO:curators]
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 HP:0001999 Facial dysmorphism 
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 HP:0002162 Low posterior hairline 
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 HP:0002750 Delayed skeletal maturation "A decreased rate of skeletal maturation. Delayed skeletal maturation can be diagnosed on the basis of an estimation of the bone age from radiographs of specific bones in the human body." [HPO:curators]
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 HP:0003265 Neonatal hyperbilirubinemia 
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 HP:0003577 Onset at birth 
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 HP:0004209 Clinodactyly of the 5th finger "Clinodactyly refers to a bending or curvature of the `fifth finger` (FMA:24949) in the radial direction (i.e., towards the 4th finger)." [HPO:curators]
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0004325 Decreased body weight 
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 HP:0006266 Small or abnormal placenta 
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 HP:0007018 Attention deficit hyperactivity disorder "Attention deficit hyperactivity disorder (ADHD) manifests at age 2-3 years or by first grade at the latest. The main symptoms are distractibility, impulsivity, hyperactivity, and often trouble organizing tasks and projects, difficulty going to sleep, and social problems from being aggressive, loud, or impatient." [HPO:curators]
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 HP:0007911 Congenital bilateral ptosis 
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 HP:0008527 Congenital sensorineural hearing loss 
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 HP:0008619 Hearing loss, sensorineural, bilateral 
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 HP:0008846 Severe intrauterine growth retardation 
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 HP:0008850 Postnatal growth retardation, severe 
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 HP:0009466 Radial deviation of fingers 
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 HP:0011120 Saddle nose "A depression of the dorsum of the nose with loss of nasal tip support and definition, shortened (vertical) nasal length, overrotation of the nasal tip, and retrusion of the nasal spine and caudal septum." [HPO:probinson]
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 HP:0011220 Prominent forehead "Forward prominence of the entire forehead, due to protrusion of the frontal bone." [pmid:19125436]
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 HP:0030084 Clinodactyly "An angulation of a digit at an interphalangeal joint in the plane of the palm (finger) or sole (toe)." [pmid:16252026]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000100448 CTSG / P08311 / cathepsin G  / reaction
 ENSG00000099769 IGFALS / P35858 / insulin like growth factor binding protein acid labile subunit  / reaction / complex
 ENSG00000087245 MMP2 / P08253 / matrix metallopeptidase 2  / reaction
 ENSG00000115461 IGFBP5 / P24593 / insulin like growth factor binding protein 5  / complex / reaction
 ENSG00000115457 IGFBP2 / P18065 / insulin like growth factor binding protein 2  / complex / reaction
 ENSG00000160691 SHC1 / P29353 / SHC adaptor protein 1  / complex / reaction
 ENSG00000133124 IRS4 / O14654 / insulin receptor substrate 4  / complex / reaction
 ENSG00000185950 IRS2 / Q9Y4H2 / insulin receptor substrate 2  / reaction / complex
 ENSG00000169047 IRS1 / P35568 / insulin receptor substrate 1  / complex / reaction
 ENSG00000122194 PLG / P00747 / plasminogen  / reaction
 ENSG00000140443 IGF1R / P08069 / insulin like growth factor 1 receptor  / reaction / complex
 ENSG00000146674 IGFBP3 / P17936 / insulin like growth factor binding protein 3  / complex / reaction
 ENSG00000167779 IGFBP6 / P24592 / insulin like growth factor binding protein 6  / complex / reaction
 ENSG00000141753 IGFBP4 / P22692 / insulin like growth factor binding protein 4  / complex / reaction
 ENSG00000146678 IGFBP1 / P08833 / insulin like growth factor binding protein 1  / complex / reaction
 ENSG00000180210 F2 / P00734 / coagulation factor II, thrombin  / reaction
 ENSG00000182752 PAPPA / Q13219 / pappalysin 1  / reaction
 ENSG00000142515 KLK3 / P07288 / kallikrein related peptidase 3  / reaction
 ENSG00000196611 MMP1 / P03956 / matrix metallopeptidase 1  / reaction
 ENSG00000116183 PAPPA2 / Q9BXP8 / pappalysin 2  / reaction






 

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