ENSG00000138829


Homo sapiens

Features
Gene ID: ENSG00000138829
  
Biological name :FBN2
  
Synonyms : FBN2 / fibrillin 2 / P35556
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 5
Strand: -1
Band: q23.3
Gene start: 128257909
Gene end: 128659185
  
Corresponding Affymetrix probe sets: 1554737_at (Human Genome U133 Plus 2.0 Array)   203184_at (Human Genome U133 Plus 2.0 Array)   215717_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000262464
Ensembl peptide - ENSP00000482132
Ensembl peptide - ENSP00000426839
Ensembl peptide - ENSP00000425596
Ensembl peptide - ENSP00000424753
Ensembl peptide - ENSP00000424571
NCBI entrez gene - 2201     See in Manteia.
OMIM - 612570
RefSeq - XM_017009228
RefSeq - NM_001999
RefSeq Peptide - NP_001990
swissprot - A0A087WYV8
swissprot - D6RJI3
swissprot - E9PHW4
swissprot - P35556
swissprot - D6REJ2
Ensembl - ENSG00000138829
  
Related genetic diseases (OMIM): 121050 - Contractural arachnodactyly, congenital, 121050
  616118 - Macular degeneration, early-onset, 616118
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fbn2aENSDARG00000051896Danio rerio
 FBN2ENSGALG00000014686Gallus gallus
 Fbn2ENSMUSG00000024598Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
FBN1 / P35555 / fibrillin 1ENSG0000016614768
FBN3 / Q75N90 / fibrillin 3ENSG0000014244966
LTBP2 / Q14767 / latent transforming growth factor beta binding protein 2ENSG0000011968118
LTBP1 / Q14766 / latent transforming growth factor beta binding protein 1ENSG0000004932317
LTBP4 / Q8N2S1 / latent transforming growth factor beta binding protein 4ENSG0000009000616
LTBP3 / Q9NS15 / latent transforming growth factor beta binding protein 3ENSG0000016805613
FBLN2 / P98095 / fibulin 2ENSG0000016352011
FBLN1 / P23142 / fibulin 1ENSG000000779427
EFEMP1 / Q12805 / EGF containing fibulin extracellular matrix protein 1ENSG000001153804
EFEMP2 / O95967 / EGF containing fibulin extracellular matrix protein 2ENSG000001726384
FBLN5 / Q9UBX5 / fibulin 5ENSG000001400924


Protein motifs (from Interpro)
Interpro ID Name
 IPR000152  EGF-type aspartate/asparagine hydroxylation site
 IPR000742  EGF-like domain
 IPR001881  EGF-like calcium-binding domain
 IPR009030  Growth factor receptor cysteine-rich domain superfamily
 IPR013032  EGF-like, conserved site
 IPR017878  TB domain
 IPR018097  EGF-like calcium-binding, conserved site
 IPR026823  Complement Clr-like EGF domain
 IPR036773  TGF-beta binding (TB) domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0022617 extracellular matrix disassembly TAS
 biological_processGO:0030198 extracellular matrix organization TAS
 biological_processGO:0030326 embryonic limb morphogenesis IEA
 biological_processGO:0030501 positive regulation of bone mineralization ISS
 biological_processGO:0035108 limb morphogenesis IEA
 biological_processGO:0035583 sequestering of TGFbeta in extracellular matrix ISS
 biological_processGO:0043010 camera-type eye development IEP
 biological_processGO:0045669 positive regulation of osteoblast differentiation ISS
 biological_processGO:0048048 embryonic eye morphogenesis IEP
 biological_processGO:0060346 bone trabecula formation ISS
 biological_processGO:0090287 regulation of cellular response to growth factor stimulus IBA
 cellular_componentGO:0001527 microfibril IDA
 cellular_componentGO:0005576 extracellular region TAS
 cellular_componentGO:0031012 extracellular matrix HDA
 molecular_functionGO:0005201 extracellular matrix structural constituent IEA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030023 extracellular matrix constituent conferring elasticity IC


Pathways (from Reactome)
Pathway description
Degradation of the extracellular matrix
Elastic fibre formation
Molecules associated with elastic fibres


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000218 High palate "Height of the palate more than 2 SD above the mean (objective) or palatal height at the level of the first permanent molar more than twice the height of the teeth (subjective)." [pmid:19125428]
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 HP:0000248 Brachycephaly "Brachycephaly refers to a short, wide head, which is often caused by premature closure of both coronal sutures." [HPO:curators]
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 HP:0000268 Dolichocephaly 
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 HP:0000347 Mandibular hypoplasia "Underdevelopment of the mandible." [HPO:curators]
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 HP:0000470 Short neck 
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 HP:0000505 Impaired vision 
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 HP:0000545 Myopia 
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 HP:0000608 Macular degeneration 
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 HP:0000768 Pectus carinatum "A deformity of the chest caused by overgrowth of the ribs and characterized by protrusion of the sternum." [HPO:curators]
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 HP:0000938 Osteopenia "Osteopenia refers to a reduction in bone mineral density (BMD) below normal peak BMD but not low enough to be classified as osteoporosis. According to the WHO, osteopenia is characterized by a value of BMD more than 1 standard deviation below the young adult mean, but less than 2 standard deviations below this value." [HPO:curators]
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 HP:0001083 Ectopia lentis 
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 HP:0001166 Arachnodactyly "Abnormally long and slender fingers ("spider fingers")." [HPO:curators]
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 HP:0001181 Adducted thumbs 
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 HP:0001270 Motor retardation 
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 HP:0001387 Joint stiffness "Joint stiffness is a perceived sensation of tightness in a joint or joints when attempting to move them after a period of inactivity. Joint stiffness typically subsides over time." [HPO:curators]
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 HP:0001519 Dolichostenomelia "A tall and slim body build with increased arm span to height ratio (>1.05) and a reduced upper-to-lower segment ratio (<0.85), i.e., unusually long arms and legs. The extremities as well as the hands and feet are unusually slim." [HPO:curators]
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 HP:0001533 Asthenic habitus "Asthenic habitus refers to a slender build with long limbs, an angular profile, and prominent muscles or bones." [HPO:curators]
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 HP:0001629 Ventricular septal defect "A hole between the two bottom chambers (ventricles) of the heart. The defect is centered around the most superior aspect of the ventricular septum." [HPO:curators]
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 HP:0001631 Atrial septal defect "Atrial septal defect (ASD) is a congenital heart defect that enables blood flow between the left and right atria via the interatrial septum. The three common types of ASD are sinus venosus defects, ostium secundum defects, and ostium primum defects." [HPO:curators]
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 HP:0001634 Mitral valve prolapse 
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 HP:0001643 Patent ductus arteriosus 
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 HP:0001647 Bicuspid aortic valve "The presence of a bicuspid `aortic valve` (FMA:7236)." [HPO:probinson]
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 HP:0001653 Mitral regurgitation "An `abnormality of the mitral valve` (HP:0001633) characterized by insufficiency or incompetence of the mitral valve resulting in retrograde leaking of blood through the mitral valve upon ventricular contraction." [HPO:probinson]
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 HP:0001762 Talipes equinovarus "Also called clubfoot typically has 4 main components: inversion and adduction of the forefoot; inversion of the heel and hindfoot; equinus (limitation of extension) of the ankle and subtalar joint; and internal rotation of the leg. Clubfoot is a complex, multifactorial deformity with genetic and intrauterine factors. One popular theory postulates that a clubfoot is a result of intrauterine maldevelopment of the talus that leads to adduction and plantarflexion of the foot. On radiographic projection a clubfoot can be noted as parallel axes of talus and calcaneus." [HPO:curators]
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 HP:0001840 Metatarsus varus "Metatarsus varus (adductus) is one of the most common foot deformities, that is defined as a transverse plane deformity in Lisfranc s (tarsometatarsal) joints in which the metatarsals are deviated medially. The relationship between talus and calcaneus is normal. On inspection the toes angle abruptly towards the midline, creating a C-shaped lateral foot border with a prominent styloid process of the 5th metatarsal. The result is that the forefoot is twisted inwards relative to the heel, so that the sole faces the midline." [HPO:curators]
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 HP:0002007 Frontal bossing "The presence of an unusually prominent forehead." [HPO:curators]
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 HP:0002247 Duodenal atresia "A developmental defect resulting in complete obliteration of the duodenal lumen, that is, an abnormal closure of the duodenum." [HPO:curator]
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 HP:0002566 Intestinal malrotation "An abnormality of the intestinal rotation and fixation that normally occurs during the development of the gut. This can lead to volvulus, or twisting of the intestine that causes obstruction and necrosis." [HPO:curators]
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 HP:0002575 Tracheoesophageal fistula "An abnormal connection (fistula) between the esophagus and the trachea." [HPO:curators]
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 HP:0002616 Aortic root dilatation 
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 HP:0002751 Kyphoscoliosis 
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 HP:0002804 Arthrogryposis multiplex congenita 
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 HP:0002987 Elbow contractures 
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 HP:0002999 Dislocation of patella "The kneecap normally is located within the groove termed trochlea on the distal femur and can slide up and down in it. Patellar dislocation occurs if the patella fully dislocates out of the groove." [HPO:curators]
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 HP:0003273 Hip contractures 
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 HP:0004942 Aortic aneurysms 
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 HP:0005684 Distal arthrogryposis 
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 HP:0006380 Knee flexion deformities 
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 HP:0007663 Decreased central vision 
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 HP:0008453 Congenital kyphoscoliosis 
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 HP:0008544 Abnormally folded helix 
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 HP:0008962 Hypoplastic calf muscles 
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 HP:0009465 Ulnar deviation of fingers 
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 HP:0009901 Crumpled ear helices 
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 HP:0010499 Patellar subluxation "The kneecap normally is located within the groove termed trochlea on the distal femur and can slide up and down in it. Patellar subluxation refers to an unstable kneecap that does not slide centrally within its groove, i.e., a partial dislocation of the patella." [HPO:curators]
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 HP:0030799 Scaphocephaly "Scaphocephaly is a subtype of dolichocephaly where the anterior and posterior aspects of the cranial vault are pointed (boat-shaped). Scaphocephaly is caused by a precocious fusion of sagittal suture without other associated synostosis." [HPO:probinson, PMID:16156241, PMID:23960302]
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 HP:0100490 Camptodactyly (hands) "Contractures of one ore more joints of the fingers." [HPO:sdoelken]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000087245 MMP2 / P08253 / matrix metallopeptidase 2  / reaction
 ENSG00000113083 LOX / P28300 / lysyl oxidase  / reaction
 ENSG00000197614 MFAP5 / Q13361 / microfibril associated protein 5  / reaction / complex
 ENSG00000037749 MFAP3 / P55082 / microfibril associated protein 3  / reaction / complex
 ENSG00000166482 MFAP4 / P55083 / microfibril associated protein 4  / reaction / complex
 ENSG00000117122 MFAP2 / P55001 / microfibril associated protein 2  / complex / reaction
 ENSG00000109072 VTN / P04004 / vitronectin  / reaction / complex
 ENSG00000138829 FBN2 / P35556 / fibrillin 2  / -
 ENSG00000140259 MFAP1 / P55081 / microfibril associated protein 1  / reaction / complex
 ENSG00000049540 ELN / P15502 / elastin  / complex
 ENSG00000137745 MMP13 / P45452 / matrix metallopeptidase 13  / reaction
 ENSG00000129038 LOXL1 / Q08397 / lysyl oxidase like 1  / reaction
 ENSG00000140564 FURIN / P09958 / furin, paired basic amino acid cleaving enzyme  / reaction
 ENSG00000140092 FBLN5 / Q9UBX5 / fibulin 5  / complex
 ENSG00000100985 MMP9 / P14780 / matrix metallopeptidase 9  / reaction
 ENSG00000138080 Q9Y6C2 / EMILIN1 / elastin microfibril interfacer 1  / reaction / complex
 ENSG00000262406 MMP12 / P39900 / matrix metallopeptidase 12  / reaction






 

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