ENSG00000157110


Homo sapiens

Features
Gene ID: ENSG00000157110
  
Biological name :RBPMS
  
Synonyms : Q93062 / RBPMS / RNA binding protein, mRNA processing factor
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 8
Strand: 1
Band: p12
Gene start: 30384479
Gene end: 30572261
  
Corresponding Affymetrix probe sets: 1557223_at (Human Genome U133 Plus 2.0 Array)   207836_s_at (Human Genome U133 Plus 2.0 Array)   207837_at (Human Genome U133 Plus 2.0 Array)   209487_at (Human Genome U133 Plus 2.0 Array)   209488_s_at (Human Genome U133 Plus 2.0 Array)   231961_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000429086
Ensembl peptide - ENSP00000428675
Ensembl peptide - ENSP00000430342
Ensembl peptide - ENSP00000430893
Ensembl peptide - ENSP00000430638
Ensembl peptide - ENSP00000430370
Ensembl peptide - ENSP00000287771
Ensembl peptide - ENSP00000318102
Ensembl peptide - ENSP00000340176
Ensembl peptide - ENSP00000380486
Ensembl peptide - ENSP00000427896
NCBI entrez gene - 11030     See in Manteia.
OMIM - 601558
RefSeq - XM_017012992
RefSeq - NM_001008712
RefSeq - NM_006867
RefSeq - XM_017012980
RefSeq - XM_017012981
RefSeq - XM_017012982
RefSeq - XM_017012984
RefSeq - XM_017012986
RefSeq - XM_017012987
RefSeq - XM_017012988
RefSeq - XM_017012989
RefSeq - XM_017012990
RefSeq - NM_001008710
RefSeq - NM_001008711
RefSeq Peptide - NP_001008711
RefSeq Peptide - NP_001008712
RefSeq Peptide - NP_006858
RefSeq Peptide - NP_001008710
swissprot - H0YC46
swissprot - B4E3T4
swissprot - E5RJD7
swissprot - Q93062
swissprot - E5RJ31
swissprot - E5RFP4
swissprot - H0YBU9
Ensembl - ENSG00000157110
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbpmsENSDARG00000099396Danio rerio
 RBPMSENSGALG00000010291Gallus gallus
 RbpmsENSMUSG00000031586Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q6ZRY4 / RBPMS2 / RNA binding protein, mRNA processing factor 2ENSG0000016683157


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006396 RNA processing TAS
 biological_processGO:0006979 response to oxidative stress IMP
 biological_processGO:0010862 positive regulation of pathway-restricted SMAD protein phosphorylation IDA
 biological_processGO:0060391 positive regulation of SMAD protein signal transduction IDA
 cellular_componentGO:0000932 P-body IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005685 U1 snRNP IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0010494 cytoplasmic stress granule IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003713 transcription coactivator activity IDA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008143 poly(A) binding IDA
 molecular_functionGO:0030619 U1 snRNA binding IBA
 molecular_functionGO:0035614 snRNA stem-loop binding IBA
 molecular_functionGO:0042803 protein homodimerization activity IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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