ENSMUSG00000031586


Mus musculus

Features
Gene ID: ENSMUSG00000031586
  
Biological name :Rbpms
  
Synonyms : Q9WVB0 / Rbpms / RNA-binding protein with multiple splicing
  
Possible biological names infered from orthology : Q93062 / RNA binding protein, mRNA processing factor
  
Species: Mus musculus
  
Chr. number: 8
Strand: -1
Band: A4
Gene start: 33782643
Gene end: 33929863
  
Corresponding Affymetrix probe sets: 10578123 (MoGene1.0st)   1425652_s_at (Mouse Genome 430 2.0 Array)   1429359_s_at (Mouse Genome 430 2.0 Array)   1437161_x_at (Mouse Genome 430 2.0 Array)   1455936_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000033994
Ensembl peptide - ENSMUSP00000033995
Ensembl peptide - ENSMUSP00000055813
Ensembl peptide - ENSMUSP00000138140
Ensembl peptide - ENSMUSP00000138726
Ensembl peptide - ENSMUSP00000140387
Ensembl peptide - ENSMUSP00000138361
Ensembl peptide - ENSMUSP00000138420
Ensembl peptide - ENSMUSP00000138483
Ensembl peptide - ENSMUSP00000138533
NCBI entrez gene - 19663     See in Manteia.
MGI - MGI:1334446
RefSeq - XM_006509037
RefSeq - NM_001042674
RefSeq - NM_001042675
RefSeq - NM_001286168
RefSeq - NM_019733
RefSeq - XM_006509035
RefSeq Peptide - NP_001273097
RefSeq Peptide - NP_062707
RefSeq Peptide - NP_001036139
RefSeq Peptide - NP_001036140
swissprot - S4R1T1
swissprot - S4R1Y2
swissprot - S4R280
swissprot - S4R2P3
swissprot - T1ECW4
swissprot - Q9WVB0
swissprot - S4R1A1
Ensembl - ENSMUSG00000031586
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbpmsENSDARG00000099396Danio rerio
 RBPMSENSGALG00000010291Gallus gallus
 RBPMSENSG00000157110Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q8VC52 / Rbpms2 / RNA binding protein with multiple splicing 2 / Q6ZRY4* / RNA binding protein, mRNA processing factor 2*ENSMUSG0000003238756


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome IBA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006979 response to oxidative stress ISS
 biological_processGO:0010862 positive regulation of pathway-restricted SMAD protein phosphorylation ISO
 biological_processGO:0060391 positive regulation of SMAD protein signal transduction ISS
 cellular_componentGO:0000932 P-body IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005685 U1 snRNP IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0010494 cytoplasmic stress granule ISS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003713 transcription coactivator activity ISO
 molecular_functionGO:0003723 RNA binding ISO
 molecular_functionGO:0008143 poly(A) binding ISS
 molecular_functionGO:0030619 U1 snRNA binding IBA
 molecular_functionGO:0035614 snRNA stem-loop binding IBA
 molecular_functionGO:0042803 protein homodimerization activity ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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