ENSGALG00000010291


Gallus gallus

Features
Gene ID: ENSGALG00000010291
  
Biological name :RBPMS
  
Synonyms : RBPMS / RNA binding protein, mRNA processing factor
  
Possible biological names infered from orthology : Q93062 / Q9WVB0 / RNA-binding protein with multiple splicing
  
Species: Gallus gallus
  
Chr. number: 4
Strand: -1
Band:
Gene start: 35003526
Gene end: 35007740
  
Corresponding Affymetrix probe sets: Gga.5816.1.S1_at (Chicken Array)   Gga.5816.2.S1_a_at (Chicken Array)   Gga.5816.3.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000016725
NCBI entrez gene - 428738     See in Manteia.
RefSeq - XM_015276622
swissprot - F1NAP9
Ensembl - ENSGALG00000010291
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rbpmsENSDARG00000099396Danio rerio
 RBPMSENSG00000157110Homo sapiens
 RbpmsENSMUSG00000031586Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9W6I1 / RBPMS2 / RNA-binding protein with multiple splicing 2 / Q6ZRY4* / Q8VC52* / RNA binding protein, mRNA processing factor 2*ENSGALG0000003098875


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006979 response to oxidative stress IEA
 biological_processGO:0010862 positive regulation of pathway-restricted SMAD protein phosphorylation IEA
 biological_processGO:0060391 positive regulation of SMAD protein signal transduction IEA
 biological_processGO:1903506 regulation of nucleic acid-templated transcription IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0010494 cytoplasmic stress granule IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003713 transcription coactivator activity IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008143 poly(A) binding IEA
 molecular_functionGO:0042803 protein homodimerization activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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