ENSDARG00000099396


Danio rerio

Features
Gene ID: ENSDARG00000099396
  
Biological name :rbpms
  
Synonyms : rbpms / RNA binding protein with multiple splicing
  
Possible biological names infered from orthology : Q93062 / Q9WVB0 / RNA binding protein, mRNA processing factor
  
Species: Danio rerio
  
Chr. number: 7
Strand: 1
Band:
Gene start: 74141297
Gene end: 74144215
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSDARP00000140207
swissprot - E7F9Q3
ZFIN ID - ZDB-GENE-161017-145
Ensembl - ENSDARG00000099396
  
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RBPMSENSGALG00000010291Gallus gallus
 RBPMSENSG00000157110Homo sapiens
 RbpmsENSMUSG00000031586Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
rbpms2b / RNA binding protein with multiple splicing 2b / Q8VC52* / RBPMS2* / Q6ZRY4* / RNA binding protein with multiple splicing 2* / RNA binding protein, mRNA processing factor 2*ENSDARG0000007957866
rbpms2a / RNA binding protein with multiple splicing 2aENSDARG0000004593066


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0030218 erythrocyte differentiation IMP
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 ZFA:0000033 intermediate cell mass of mesoderm intermediate cell mass of mesoderm nucleate erythrocyte decreased amount , abnormal
Show

 ZFA:0009256 nucleate erythrocyte nucleate erythrocyte decreased amount , abnormal
Show

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr