ENSG00000157349


Homo sapiens

Features
Gene ID: ENSG00000157349
  
Biological name :DDX19B
  
Synonyms : DDX19B / DEAD-box helicase 19B / Q9UMR2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: q22.1
Gene start: 70289663
Gene end: 70335283
  
Corresponding Affymetrix probe sets: 202576_s_at (Human Genome U133 Plus 2.0 Array)   230974_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000457366
Ensembl peptide - ENSP00000456757
Ensembl peptide - ENSP00000457633
Ensembl peptide - ENSP00000459407
Ensembl peptide - ENSP00000288071
Ensembl peptide - ENSP00000348271
Ensembl peptide - ENSP00000377267
Ensembl peptide - ENSP00000392639
Ensembl peptide - ENSP00000454495
Ensembl peptide - ENSP00000454571
Ensembl peptide - ENSP00000455193
Ensembl peptide - ENSP00000455813
Ensembl peptide - ENSP00000456574
NCBI entrez gene - 11269     See in Manteia.
OMIM - 605812
RefSeq - NM_001257173
RefSeq - NM_001014449
RefSeq - NM_001014451
RefSeq - NM_001257172
RefSeq - NM_001257174
RefSeq - NM_001257175
RefSeq - NM_007242
RefSeq - XM_006721127
RefSeq - XM_011522832
RefSeq - XM_011522833
RefSeq - XM_011522834
RefSeq - XM_017022890
RefSeq Peptide - NP_001014449
RefSeq Peptide - NP_001014451
RefSeq Peptide - NP_009173
RefSeq Peptide - NP_001244101
RefSeq Peptide - NP_001244102
RefSeq Peptide - NP_001244103
RefSeq Peptide - NP_001244104
swissprot - H3BTX1
swissprot - H3BUH0
swissprot - A0A024QZ90
swissprot - Q9UMR2
swissprot - A0A0U4B4U6
swissprot - H3BMQ5
swissprot - H3BMV7
swissprot - H3BPV3
swissprot - H3BQK0
Ensembl - ENSG00000157349
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ddx19ENSDARG00000005699Danio rerio
 zgc:193690ENSDARG00000044325Danio rerio
 DDX19BENSGALG00000039967Gallus gallus
 Ddx19bENSMUSG00000033658Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
AC012184.2ENSG0000026053799
DDX19A / Q9NUU7 / DEAD-box helicase 19AENSG0000016887295
DDX25 / Q9UHL0 / DEAD-box helicase 25ENSG0000010983253


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR011545  DEAD/DEAH box helicase domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR014014  RNA helicase, DEAD-box type, Q motif
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006406 mRNA export from nucleus TAS
 biological_processGO:0008380 RNA splicing IBA
 biological_processGO:0010468 regulation of gene expression IBA
 biological_processGO:0010501 RNA secondary structure unwinding IBA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0051028 mRNA transport IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005643 nuclear pore TAS
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0005737 cytoplasm TAS
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IBA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding TAS
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA
 molecular_functionGO:0004386 helicase activity TAS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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