ENSGALG00000039967


Gallus gallus

Features
Gene ID: ENSGALG00000039967
  
Biological name :DDX19B
  
Synonyms : DDX19B
  
Possible biological names infered from orthology : AC012184.2 / ATP-dependent RNA helicase DDX19B isoform 3 / DEAD-box helicase 19B / Q9UMR2
  
Species: Gallus gallus
  
Chr. number: 21
Strand: -1
Band:
Gene start: 4849533
Gene end: 4856745
  
Corresponding Affymetrix probe sets: Gga.10704.1.A1_at (Chicken Array)   Gga.19238.1.S1_s_at (Chicken Array)   Gga.7753.1.S1_at (Chicken Array)   GgaAffx.11586.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000054984
NCBI entrez gene - 426504     See in Manteia.
RefSeq - NM_001006568
RefSeq - XM_015296933
RefSeq Peptide - NP_001006568
swissprot - Q5ZMC1
Ensembl - ENSGALG00000039967
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ddx19ENSDARG00000005699Danio rerio
 zgc:193690ENSDARG00000044325Danio rerio
 AC012184.2ENSG00000260537Homo sapiens
 DDX19BENSG00000157349Homo sapiens
 Ddx19bENSMUSG00000033658Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR011545  DEAD/DEAH box helicase domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR014014  RNA helicase, DEAD-box type, Q motif
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008380 RNA splicing IBA
 biological_processGO:0010468 regulation of gene expression IBA
 biological_processGO:0010501 RNA secondary structure unwinding IBA
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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