ENSMUSG00000033658


Mus musculus

Features
Gene ID: ENSMUSG00000033658
  
Biological name :Ddx19b
  
Synonyms : ATP-dependent RNA helicase DDX19B isoform 3 / Ddx19b
  
Possible biological names infered from orthology : DEAD-box helicase 19B / Q9UMR2
  
Species: Mus musculus
  
Chr. number: 8
Strand: -1
Band: E1
Gene start: 111003188
Gene end: 111031751
  
Corresponding Affymetrix probe sets: 10581737 (MoGene1.0st)   1424590_at (Mouse Genome 430 2.0 Array)   1425203_at (Mouse Genome 430 2.0 Array)   1425204_s_at (Mouse Genome 430 2.0 Array)   1425205_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000038551
Ensembl peptide - ENSMUSP00000066806
NCBI entrez gene - 234733     See in Manteia.
MGI - MGI:2148251
RefSeq - NM_172284
RefSeq - NM_001190786
RefSeq - NM_001190800
RefSeq Peptide - NP_001177715
RefSeq Peptide - NP_001177729
RefSeq Peptide - NP_758488
swissprot - Q8BZY3
swissprot - Q8R3C7
Ensembl - ENSMUSG00000033658
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ddx19ENSDARG00000005699Danio rerio
 zgc:193690ENSDARG00000044325Danio rerio
 DDX19BENSGALG00000039967Gallus gallus
 DDX19BENSG00000157349Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ddx19a / Q61655 / ATP-dependent RNA helicase DDX19A / Q9NUU7* / DEAD-box helicase 19A*ENSMUSG0000001502389
Ddx25 / Q9QY15 / ATP-dependent RNA helicase DDX25 / Q9UHL0* / DEAD-box helicase 25*ENSMUSG0000003210151


Protein motifs (from Interpro)
Interpro ID Name
 IPR001650  Helicase, C-terminal
 IPR011545  DEAD/DEAH box helicase domain
 IPR014001  Helicase superfamily 1/2, ATP-binding domain
 IPR014014  RNA helicase, DEAD-box type, Q motif
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008380 RNA splicing IBA
 biological_processGO:0010468 regulation of gene expression IBA
 biological_processGO:0010501 RNA secondary structure unwinding IBA
 cellular_componentGO:0005635 nuclear envelope ISO
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0071013 catalytic step 2 spliceosome IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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