ENSG00000160710


Homo sapiens

Features
Gene ID: ENSG00000160710
  
Biological name :ADAR
  
Synonyms : ADAR / adenosine deaminase, RNA specific / P55265
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: -1
Band: q21.3
Gene start: 154582062
Gene end: 154627999
  
Corresponding Affymetrix probe sets: 201786_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000357456
Ensembl peptide - ENSP00000357459
Ensembl peptide - ENSP00000431794
NCBI entrez gene - 103     See in Manteia.
OMIM - 146920
RefSeq - NM_015841
RefSeq - XM_017000037
RefSeq - NM_001025107
RefSeq - NM_001111
RefSeq - NM_001193495
RefSeq - NM_015840
RefSeq - XM_006711109
RefSeq - XM_006711111
RefSeq - XM_006711112
RefSeq - XM_006711113
RefSeq - XM_011509060
RefSeq - XM_011509061
RefSeq - XM_011509062
RefSeq Peptide - NP_001020278
RefSeq Peptide - NP_001102
RefSeq Peptide - NP_001180424
RefSeq Peptide - NP_056655
RefSeq Peptide - NP_056656
swissprot - P55265
swissprot - H0YCK3
Ensembl - ENSG00000160710
  
Related genetic diseases (OMIM): 127400 - Dyschromatosis symmetrica hereditaria, 127400
  615010 - Aicardi-Goutieres syndrome 6, 615010
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 adarENSDARG00000012389Danio rerio
 ADARENSGALG00000021475Gallus gallus
 AdarENSMUSG00000027951Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ADARB2 / Q9NS39 / adenosine deaminase, RNA specific B2 (inactive)ENSG0000018573619
ADARB1 / P78563 / adenosine deaminase, RNA specific B1ENSG0000019738118
ADAD2 / Q8NCV1 / adenosine deaminase domain containing 2ENSG0000014095512
ADAD1 / Q96M93 / adenosine deaminase domain containing 1ENSG0000016411311
ADAT1 / Q9BUB4 / adenosine deaminase, tRNA specific 1ENSG000000654579


Protein motifs (from Interpro)
Interpro ID Name
 IPR000607  Double-stranded RNA-specific adenosine deaminase (DRADA)
 IPR002466  Adenosine deaminase/editase
 IPR014720  Double-stranded RNA-binding domain
 IPR036388  Winged helix-like DNA-binding domain superfamily
 IPR036390  Winged helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0001649 osteoblast differentiation IEA
 biological_processGO:0001701 in utero embryonic development IEA
 biological_processGO:0002244 hematopoietic progenitor cell differentiation IEA
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0002566 somatic diversification of immune receptors via somatic mutation IEA
 biological_processGO:0006382 adenosine to inosine editing TAS
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0006397 mRNA processing IEA
 biological_processGO:0009615 response to virus IMP
 biological_processGO:0016553 base conversion or substitution editing IDA
 biological_processGO:0030218 erythrocyte differentiation IEA
 biological_processGO:0031047 gene silencing by RNA IEA
 biological_processGO:0031054 pre-miRNA processing IDA
 biological_processGO:0035196 production of miRNAs involved in gene silencing by miRNA IEA
 biological_processGO:0035280 miRNA loading onto RISC involved in gene silencing by miRNA IDA
 biological_processGO:0035455 response to interferon-alpha IDA
 biological_processGO:0043066 negative regulation of apoptotic process IEA
 biological_processGO:0044387 negative regulation of protein kinase activity by regulation of protein phosphorylation IMP
 biological_processGO:0045070 positive regulation of viral genome replication IMP
 biological_processGO:0045071 negative regulation of viral genome replication IEA
 biological_processGO:0045087 innate immune response TAS
 biological_processGO:0051607 defense response to virus IEA
 biological_processGO:0060216 definitive hemopoiesis IEA
 biological_processGO:0060337 type I interferon signaling pathway TAS
 biological_processGO:0060339 negative regulation of type I interferon-mediated signaling pathway IEA
 biological_processGO:0061484 hematopoietic stem cell homeostasis IEA
 biological_processGO:0098586 cellular response to virus IEA
 biological_processGO:1900369 negative regulation of RNA interference IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0044530 supraspliceosomal complex IDA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0003726 double-stranded RNA adenosine deaminase activity IEA
 molecular_functionGO:0004000 adenosine deaminase activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
C6 deamination of adenosine
Formation of editosomes by ADAR proteins
Interferon alpha/beta signaling


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000508 Ptosis "Drooping of the eyelid." [HPO:curators]
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 HP:0000625 Eyelid, cleft "A short discontinuity of the margin of the lower or upper eyelid." [pmid:19125427]
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 HP:0000639 Nystagmus "Rhythmic, involuntary oscillations of one or both eyes related to abnormality in fixation, conjugate gaze, or vestibular mechanisms." [HPO:curators]
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 HP:0001250 Seizures "Seizures are an intermittent `abnormality of the central nervous system` (FMA:HP:0002011) due to a sudden, excessive, disorderly discharge of cerebral neurons and characterized clinically by some combination of disturbance of sensation, loss of consciousness, impairment of psychic function, or convulsive movements." [HPO:probinson]
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 HP:0001257 Spasticity "A motor disorder characterized by a velocity-dependent increase in tonic stretch reflexes with increased muscle tone, exaggerated (hyperexcitable) tendon reflexes." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001304 Torsion dystonia 
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 HP:0001332 Dystonia "An abnormally increased muscular tone that causes fixed abnormal postures. There is a slow, intermittent twisting motion that leads to exaggerated turning and posture of the extremities and trunk." [HPO:curators]
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 HP:0001337 Tremor "An unintentional, oscillating to-and-fro muscle movement." [HPO:curators]
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 HP:0001357 Plagiocephaly "An asymmetric head shape often resulting from premature closure of only one of the coronal sutures." [HPO:curators]
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 HP:0001878 Hemolytic anemia 
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 HP:0002063 Rigidity 
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 HP:0002132 Porencephaly 
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 HP:0002139 Arrhinencephaly 
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 HP:0002187 Mental retardation, profound "Severe mental retardation is defined as an intelligence quotient (IQ) below 20." [HPO:curators]
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 HP:0002371 Loss of speech 
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 HP:0002376 Developmental regression 
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 HP:0002415 Leukodystrophy 
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 HP:0002514 Cerebral calcification "The presence of calcification within brain structures." [HPO:curators]
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 HP:0003593 Early onset 
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 HP:0004374 Hemiplegia/hemiparesis "Loss of strength in the arm, leg, and sometimes face on one side of the body. Hemiplegia refers to a severe or complete loss of strength, whereas hemiparesis refers to a relatively mild loss of strength." [HPO:curators]
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 HP:0006957 Loss of ability to walk 
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 HP:0007441 Hyperpigmented/hypopigmented macules 
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 HP:0007988 Macular pallor with prominence of fovea centralis 
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 HP:0011509 Macular hyperpigmentation "Increased amount of pigmentation in the `macula lutea` (FMA:58637)." [DDD:ncarter]
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 HP:0012733 Macule "A flat, distinct, discolored area of skin less than 1 cm wide that does not involve any change in the thickness or texture of the skin." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000160710 ADAR / P55265 / adenosine deaminase, RNA specific  / reaction / complex






 

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