ENSG00000161970


Homo sapiens

Features
Gene ID: ENSG00000161970
  
Biological name :RPL26
  
Synonyms : P61254 / ribosomal protein L26 / RPL26
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: p13.1
Gene start: 8377516
Gene end: 8383250
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSP00000464143
Ensembl peptide - ENSP00000293842
Ensembl peptide - ENSP00000462619
Ensembl peptide - ENSP00000462322
Ensembl peptide - ENSP00000462249
Ensembl peptide - ENSP00000464239
Ensembl peptide - ENSP00000463470
Ensembl peptide - ENSP00000463784
Ensembl peptide - ENSP00000463910
NCBI entrez gene - 6154     See in Manteia.
OMIM - 603704
RefSeq - NM_000987
RefSeq - NM_001315531
RefSeq - NM_001315530
RefSeq Peptide - NP_001302459
RefSeq Peptide - NP_000978
RefSeq Peptide - NP_001302460
swissprot - P61254
swissprot - J3KS10
swissprot - J3KSS0
swissprot - J3QQV1
swissprot - J3QRC4
swissprot - J3QRI7
Ensembl - ENSG00000161970
  
Related genetic diseases (OMIM): 614900 - ?Diamond-Blackfan anemia 11, 614900
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl26ENSDARG00000102317Danio rerio
 RPL26L1ENSGALG00000002868Gallus gallus
 Rpl26ENSMUSG00000060938Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9UNX3 / RPL26L1 / ribosomal protein L26 like 1ENSG0000003724199
AC135178.2ENSG0000026380972


Protein motifs (from Interpro)
Interpro ID Name
 IPR005756  Ribosomal protein L26/L24, eukaryotic/archaeal
 IPR005824  KOW
 IPR005825  Ribosomal protein L24/L26, conserved site
 IPR008991  Translation protein SH3-like domain superfamily
 IPR014722  Ribosomal protein L2, domain 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay TAS
 biological_processGO:0002181 cytoplasmic translation IBA
 biological_processGO:0006364 rRNA processing TAS
 biological_processGO:0006412 translation IEA
 biological_processGO:0006413 translational initiation TAS
 biological_processGO:0006614 SRP-dependent cotranslational protein targeting to membrane TAS
 biological_processGO:0006977 DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest IMP
 biological_processGO:0019083 viral transcription TAS
 biological_processGO:0034644 cellular response to UV IMP
 biological_processGO:0042273 ribosomal large subunit biogenesis IMP
 biological_processGO:0045727 positive regulation of translation IMP
 biological_processGO:0071479 cellular response to ionizing radiation IEA
 biological_processGO:0071480 cellular response to gamma radiation IDA
 biological_processGO:1902164 positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator IMP
 biological_processGO:1902167 positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator IMP
 biological_processGO:1904803 regulation of translation involved in cellular response to UV IMP
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005730 nucleolus IDA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005829 cytosol TAS
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0015934 large ribosomal subunit IEA
 cellular_componentGO:0016020 membrane HDA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit TAS
 cellular_componentGO:0022626 cytosolic ribosome IDA
 cellular_componentGO:0070062 extracellular exosome HDA
 cellular_componentGO:1990904 ribonucleoprotein complex IMP
 molecular_functionGO:0003723 RNA binding TAS
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0048027 mRNA 5"-UTR binding IMP


Pathways (from Reactome)
Pathway description
L13a-mediated translational silencing of Ceruloplasmin expression
Peptide chain elongation
SRP-dependent cotranslational protein targeting to membrane
Viral mRNA Translation
Selenocysteine synthesis
Major pathway of rRNA processing in the nucleolus and cytosol
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Eukaryotic Translation Termination
Regulation of expression of SLITs and ROBOs
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000006 Autosomal dominant inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in heterozygotes. In the context of medical genetics, an autosomal dominant disorder is caused when a single copy of the mutant allele is present. Males and females are affected equally, and can both transmit the disorder with a risk of 50% for each child of inheriting the mutant allele." [HPO:curators]
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 HP:0000078 Abnormality of the genital tract 
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 HP:0000079 Abnormality of the urinary tract 
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 HP:0000104 Renal agenesis 
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 HP:0000175 Cleft palate "Cleft palate is a developmental defect of the `palate` (FMA:54549) resulting from a failure of fusion of the palatine processes." [HPO:curators]
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 HP:0000179 Prominent lower lip "Increased thickness of the lower lip, leading to a prominent appearance of the lower lip." [HPO:curators]
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 HP:0000402 Stenotic external auditory canal "An abnormal narrowing of the external auditory canal." [HPO:curators]
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 HP:0000413 External auditory canal atresia "Absence or failure to form of the external auditory canal." [HPO:curators]
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 HP:0000457 Flat nose 
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 HP:0000492 Abnormality of the eyelid 
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 HP:0000823 Delayed puberty 
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 HP:0000980 Pallor 
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 HP:0001155 Abnormality of the hand "An abnormality affecting one or both hands." [HPO:curators]
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 HP:0001647 Bicuspid aortic valve "The presence of a bicuspid `aortic valve` (FMA:7236)." [HPO:probinson]
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 HP:0001875 Neutropenia 
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 HP:0001903 Anemia 
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 HP:0001972 Macrocytic anemia 
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 HP:0002076 Migraine 
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 HP:0002488 Acute leukemia 
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 HP:0002984 Hypoplasia of the radius "Underdevelopment of the radius." [HPO:curators]
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 HP:0003022 Hypoplasia of the ulna "Underdevelopment of the ulna." [HPO:curators]
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 HP:0003196 Nasal hypoplasia "Underdevelopment of the `nose` (FMA:46472)." [HPO:probinson]
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 HP:0004322 Decreased body height "A height below that which is expected according to age and gender norms. Although there is no universally accepted definition of short stature, many refer to "short stature" as height more than 2 standard deviations below the mean for age and gender (or below the 3rd percentile for age and gender dependent norms)." [HPO:curators]
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 HP:0005528 Bone marrow hypoplasia 
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 HP:0006368 Forearm reduction defects 
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 HP:0009777 Aplasia of the thumb "Absent thumb." [HPO:curators]
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 HP:0010972 Anemia of inadequate production "A kind of `anemia` (HP:0001903) characterized by inadequate production of erythrocytes." [HPO:probinson]
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 HP:0011675 Arrhythmia "Any cardiac rhythm other than the normal sinus rhythm. Such a rhythm may be either of sinus or ectopic origin and either regular or irregular. An arrhythmia may be due to a disturbance in impulse formation or conduction or both." [DDD:dbrown, pmid:19063792]
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 HP:0012378 Fatigue "A subjective feeling of tiredness characterized by a lack of energy and motivation." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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