ENSGALG00000002868


Gallus gallus

Features
Gene ID: ENSGALG00000002868
  
Biological name :RPL26L1
  
Synonyms : ribosomal protein L26 / RPL26L1
  
Possible biological names infered from orthology : 60S ribosomal protein L26 / P61254 / P61255 / RPL26
  
Species: Gallus gallus
  
Chr. number: 13
Strand: 1
Band:
Gene start: 9138202
Gene end: 9153259
  
Corresponding Affymetrix probe sets: Gga.5151.2.S1_a_at (Chicken Array)   Gga.9402.1.S1_s_at (Chicken Array)   GgaAffx.12613.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000056562
Ensembl peptide - ENSGALP00000059550
Ensembl peptide - ENSGALP00000063815
Ensembl peptide - ENSGALP00000060399
Ensembl peptide - ENSGALP00000060009
Ensembl peptide - ENSGALP00000059729
Ensembl peptide - ENSGALP00000004515
Ensembl peptide - ENSGALP00000048524
NCBI entrez gene - 396400     See in Manteia.
NCBI entrez gene - 768854     See in Manteia.
RefSeq - NM_001277098
RefSeq - NM_001277099
RefSeq - NM_001097532
RefSeq Peptide - NP_001091001
RefSeq Peptide - NP_001264027
RefSeq Peptide - NP_001264028
swissprot - Q5ZJC4
swissprot - A0A1L1RLT9
swissprot - A0A1L1RLA3
swissprot - A0A1D5PUF9
swissprot - F2Z4K6
swissprot - A0A1L1RNQ4
Ensembl - ENSGALG00000002868
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl26ENSDARG00000102317Danio rerio
 RPL26ENSG00000161970Homo sapiens
 Rpl26ENSMUSG00000060938Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005756  Ribosomal protein L26/L24, eukaryotic/archaeal
 IPR005824  KOW
 IPR005825  Ribosomal protein L24/L26, conserved site
 IPR008389  ATPase, V0 complex, subunit e1/e2
 IPR008991  Translation protein SH3-like domain superfamily
 IPR014722  Ribosomal protein L2, domain 2
 IPR017385  ATPase, V0 complex, subunit e1/e2, metazoa


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002181 cytoplasmic translation IBA
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0006412 translation IEA
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006977 DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest IEA
 biological_processGO:0015991 ATP hydrolysis coupled proton transport IEA
 biological_processGO:0034644 cellular response to UV IEA
 biological_processGO:0042273 ribosomal large subunit biogenesis IEA
 biological_processGO:0045727 positive regulation of translation IEA
 biological_processGO:0071479 cellular response to ionizing radiation IEA
 biological_processGO:0071480 cellular response to gamma radiation IEA
 biological_processGO:1902164 positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator IEA
 biological_processGO:1902167 positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator IEA
 biological_processGO:1904803 regulation of translation involved in cellular response to UV IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0015934 large ribosomal subunit IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 cellular_componentGO:0022626 cytosolic ribosome IEA
 cellular_componentGO:0033179 proton-transporting V-type ATPase, V0 domain IEA
 cellular_componentGO:1990904 ribonucleoprotein complex IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IEA
 molecular_functionGO:0015078 proton transmembrane transporter activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0048027 mRNA 5"-UTR binding IEA


Pathways (from Reactome)
Pathway description
SRP-dependent cotranslational protein targeting to membrane
Formation of a pool of free 40S subunits
GTP hydrolysis and joining of the 60S ribosomal subunit
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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