ENSMUSG00000060938


Mus musculus

Features
Gene ID: ENSMUSG00000060938
  
Biological name :Rpl26
  
Synonyms : 60S ribosomal protein L26 / P61255 / Rpl26
  
Possible biological names infered from orthology : P61254 / ribosomal protein L26
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: B3
Gene start: 68901583
Gene end: 68906989
  
Corresponding Affymetrix probe sets: 10377368 (MoGene1.0st)   10466923 (MoGene1.0st)   10511629 (MoGene1.0st)   10519321 (MoGene1.0st)   1436995_a_at (Mouse Genome 430 2.0 Array)   1448109_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000098576
Ensembl peptide - ENSMUSP00000129072
Ensembl peptide - ENSMUSP00000119329
Ensembl peptide - ENSMUSP00000073175
NCBI entrez gene - 19941     See in Manteia.
MGI - MGI:106022
RefSeq - NM_009080
RefSeq Peptide - NP_033106
swissprot - B1ARA3
swissprot - B1ARA5
swissprot - P61255
swissprot - Q4FZH2
Ensembl - ENSMUSG00000060938
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpl26ENSDARG00000102317Danio rerio
 RPL26L1ENSGALG00000002868Gallus gallus
 RPL26ENSG00000161970Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005756  Ribosomal protein L26/L24, eukaryotic/archaeal
 IPR005824  KOW
 IPR005825  Ribosomal protein L24/L26, conserved site
 IPR008991  Translation protein SH3-like domain superfamily
 IPR014722  Ribosomal protein L2, domain 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002181 cytoplasmic translation IBA
 biological_processGO:0006364 rRNA processing IEA
 biological_processGO:0006412 translation IEA
 biological_processGO:0006977 DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest IDA
 biological_processGO:0034644 cellular response to UV IEA
 biological_processGO:0042273 ribosomal large subunit biogenesis IEA
 biological_processGO:0045727 positive regulation of translation IEA
 biological_processGO:0071479 cellular response to ionizing radiation IMP
 biological_processGO:0071480 cellular response to gamma radiation IEA
 biological_processGO:1902164 positive regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator IEA
 biological_processGO:1902167 positive regulation of intrinsic apoptotic signaling pathway in response to DNA damage by p53 class mediator IMP
 biological_processGO:1904803 regulation of translation involved in cellular response to UV IEA
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005840 ribosome IEA
 cellular_componentGO:0015934 large ribosomal subunit IEA
 cellular_componentGO:0022625 cytosolic large ribosomal subunit IBA
 cellular_componentGO:0022626 cytosolic ribosome IEA
 cellular_componentGO:1990904 ribonucleoprotein complex IEA
 molecular_functionGO:0003723 RNA binding IBA
 molecular_functionGO:0003735 structural constituent of ribosome IBA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0048027 mRNA 5"-UTR binding IEA


Pathways (from Reactome)
Pathway description
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC)


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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