ENSG00000162572


Homo sapiens

Features
Gene ID: ENSG00000162572
  
Biological name :SCNN1D
  
Synonyms : P51172 / SCNN1D / sodium channel epithelial 1 delta subunit
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 1
Strand: 1
Band: p36.33
Gene start: 1280436
Gene end: 1292029
  
Corresponding Affymetrix probe sets: 208458_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000383717
Ensembl peptide - ENSP00000368411
Ensembl peptide - ENSP00000420548
Ensembl peptide - ENSP00000449804
Ensembl peptide - ENSP00000321594
Ensembl peptide - ENSP00000339504
Ensembl peptide - ENSP00000368393
NCBI entrez gene - 6339     See in Manteia.
OMIM - 601328
RefSeq - XM_017002044
RefSeq - XM_017002038
RefSeq - XM_017002039
RefSeq - XM_017002040
RefSeq - XM_017002041
RefSeq - XM_017002042
RefSeq - XM_017002043
RefSeq - NM_001130413
RefSeq - XM_011541899
RefSeq - XM_011541901
RefSeq - XM_011541902
RefSeq - XM_011541905
RefSeq - XM_011541906
RefSeq - XM_011541908
RefSeq - XM_011541920
RefSeq - XM_011541925
RefSeq - XM_011541929
RefSeq - XM_011541932
RefSeq - XM_011541933
RefSeq - XM_017002037
RefSeq Peptide - NP_001123885
swissprot - C9JDY8
swissprot - F8VWH5
swissprot - H0Y3F1
swissprot - A6NNF7
swissprot - P51172
Ensembl - ENSG00000162572
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SCNN1DENSGALG00000001835Gallus gallus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P37088 / SCNN1A / sodium channel epithelial 1 alpha subunitENSG0000011131932
P51170 / SCNN1G / sodium channel epithelial 1 gamma subunitENSG0000016682821
P51168 / SCNN1B / sodium channel epithelial 1 beta subunitENSG0000016844720
ASIC4 / Q96FT7 / acid sensing ion channel subunit family member 4ENSG0000007218216
ASIC1 / P78348 / acid sensing ion channel subunit 1ENSG0000011088115
ASIC2 / Q16515 / acid sensing ion channel subunit 2ENSG0000010868414
ASIC3 / Q9UHC3 / acid sensing ion channel subunit 3ENSG0000021319913
ASIC5 / Q9NY37 / acid sensing ion channel subunit family member 5ENSG0000025639412


Protein motifs (from Interpro)
Interpro ID Name
 IPR001873  Epithelial sodium channel
 IPR004724  Epithelial sodium channel, chordates
 IPR020903  Epithelial sodium channel, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006811 ion transport IEA
 biological_processGO:0006814 sodium ion transport TAS
 biological_processGO:0034220 ion transmembrane transport TAS
 biological_processGO:0035725 sodium ion transmembrane transport IEA
 biological_processGO:0050896 response to stimulus IEA
 biological_processGO:0050909 sensory perception of taste IEA
 cellular_componentGO:0005886 plasma membrane TAS
 cellular_componentGO:0015629 actin cytoskeleton IDA
 cellular_componentGO:0016020 membrane IDA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005272 sodium channel activity IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0015280 ligand-gated sodium channel activity TAS


Pathways (from Reactome)
Pathway description
Stimuli-sensing channels


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000166828 P51170 / SCNN1G / sodium channel epithelial 1 gamma subunit  / complex
 ENSG00000168447 P51168 / SCNN1B / sodium channel epithelial 1 beta subunit  / complex






 

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