ENSG00000163714


Homo sapiens

Features
Gene ID: ENSG00000163714
  
Biological name :U2SURP
  
Synonyms : O15042 / U2 snRNP associated SURP domain containing / U2SURP
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 3
Strand: 1
Band: q23
Gene start: 142964497
Gene end: 143060546
  
Corresponding Affymetrix probe sets: 212058_at (Human Genome U133 Plus 2.0 Array)   212060_at (Human Genome U133 Plus 2.0 Array)   212061_at (Human Genome U133 Plus 2.0 Array)   236431_at (Human Genome U133 Plus 2.0 Array)   236696_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000420210
Ensembl peptide - ENSP00000420575
Ensembl peptide - ENSP00000475195
Ensembl peptide - ENSP00000430816
Ensembl peptide - ENSP00000422011
Ensembl peptide - ENSP00000418220
Ensembl peptide - ENSP00000418465
Ensembl peptide - ENSP00000418563
NCBI entrez gene - 23350     See in Manteia.
RefSeq - XM_017006039
RefSeq - NM_001080415
RefSeq - NM_001320219
RefSeq - NM_001320220
RefSeq - NM_001320222
RefSeq - XM_005247248
RefSeq - XM_017006037
RefSeq - XM_017006038
RefSeq Peptide - NP_001073884
RefSeq Peptide - NP_001307148
RefSeq Peptide - NP_001307151
RefSeq Peptide - NP_001307149
swissprot - C9JDJ7
swissprot - H0Y8D9
swissprot - H7C4V2
swissprot - U3KPT1
swissprot - O15042
swissprot - C9J5L1
swissprot - E7EW00
swissprot - E7ET15
Ensembl - ENSG00000163714
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 u2surpENSDARG00000061490Danio rerio
 U2SURPENSGALG00000002612Gallus gallus
 Q6NV83ENSMUSG00000032407Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000061  SWAP/Surp
 IPR000504  RNA recognition motif domain
 IPR006569  CID domain
 IPR008942  ENTH/VHS
 IPR013170  mRNA splicing factor Cwf21 domain
 IPR035009  SR140, RNA recognition motif
 IPR035967  SWAP/Surp superfamily
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000398 mRNA splicing, via spliceosome TAS
 biological_processGO:0006396 RNA processing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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