ENSGALG00000002612


Gallus gallus

Features
Gene ID: ENSGALG00000002612
  
Biological name :U2SURP
  
Synonyms : U2 snRNP associated SURP domain containing / U2SURP
  
Possible biological names infered from orthology : O15042 / Q6NV83
  
Species: Gallus gallus
  
Chr. number: 9
Strand: 1
Band:
Gene start: 10631746
Gene end: 10674055
  
Corresponding Affymetrix probe sets: Gga.4930.1.S1_at (Chicken Array)   Gga.4930.2.S1_a_at (Chicken Array)   Gga.4930.3.S1_a_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000004104
Ensembl peptide - ENSGALP00000053953
Ensembl peptide - ENSGALP00000051824
NCBI entrez gene - 424773     See in Manteia.
RefSeq - XM_004937071
RefSeq - XM_422593
swissprot - E1C0P9
swissprot - A0A1D5PM80
swissprot - A0A1D5PGA3
Ensembl - ENSGALG00000002612
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 u2surpENSDARG00000061490Danio rerio
 O15042ENSG00000163714Homo sapiens
 Q6NV83ENSMUSG00000032407Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000061  SWAP/Surp
 IPR000504  RNA recognition motif domain
 IPR006569  CID domain
 IPR008942  ENTH/VHS
 IPR012677  Nucleotide-binding alpha-beta plait domain superfamily
 IPR013170  mRNA splicing factor Cwf21 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006396 RNA processing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr