ENSMUSG00000032407


Mus musculus

Features
Gene ID: ENSMUSG00000032407
  
Biological name :U2surp
  
Synonyms : Q6NV83 / U2 snRNP-associated SURP domain containing / U2surp
  
Possible biological names infered from orthology : O15042
  
Species: Mus musculus
  
Chr. number: 9
Strand: -1
Band: E3.3
Gene start: 95456898
Gene end: 95511996
  
Corresponding Affymetrix probe sets: 10595723 (MoGene1.0st)   1434300_at (Mouse Genome 430 2.0 Array)   1454914_at (Mouse Genome 430 2.0 Array)   1455351_at (Mouse Genome 430 2.0 Array)   1455352_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000140525
Ensembl peptide - ENSMUSP00000140331
Ensembl peptide - ENSMUSP00000140614
Ensembl peptide - ENSMUSP00000151121
Ensembl peptide - ENSMUSP00000077482
Ensembl peptide - ENSMUSP00000078602
NCBI entrez gene - 67958     See in Manteia.
MGI - MGI:1915208
RefSeq - XM_017313545
RefSeq - NM_001114977
RefSeq - NM_001357974
RefSeq - NM_001357975
RefSeq - NM_026476
RefSeq - XM_006511384
RefSeq - XM_017313542
RefSeq - XM_017313543
RefSeq - XM_017313544
RefSeq Peptide - NP_001344904
RefSeq Peptide - NP_080752
RefSeq Peptide - NP_001108449
RefSeq Peptide - NP_001344903
swissprot - Q6NV83
swissprot - A0A087WR93
swissprot - A0A087WRG2
swissprot - A0A087WQT2
Ensembl - ENSMUSG00000032407
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 u2surpENSDARG00000061490Danio rerio
 U2SURPENSGALG00000002612Gallus gallus
 O15042ENSG00000163714Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000061  SWAP/Surp
 IPR000504  RNA recognition motif domain
 IPR006569  CID domain
 IPR008942  ENTH/VHS
 IPR013170  mRNA splicing factor Cwf21 domain
 IPR035009  SR140, RNA recognition motif
 IPR035967  SWAP/Surp superfamily
 IPR035979  RNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006396 RNA processing IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm ISO
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
mRNA Splicing - Major Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr