ENSG00000166123


Homo sapiens

Features
Gene ID: ENSG00000166123
  
Biological name :GPT2
  
Synonyms : glutamic--pyruvic transaminase 2 / GPT2 / Q8TD30
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 16
Strand: 1
Band: q11.2
Gene start: 46884378
Gene end: 46931297
  
Corresponding Affymetrix probe sets: 224839_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000457475
Ensembl peptide - ENSP00000345282
Ensembl peptide - ENSP00000413804
NCBI entrez gene - 84706     See in Manteia.
OMIM - 138210
RefSeq - XM_017023790
RefSeq - NM_001142466
RefSeq - NM_133443
RefSeq Peptide - NP_001135938
RefSeq Peptide - NP_597700
swissprot - A0A024R6R2
swissprot - H3BU54
swissprot - Q8TD30
Ensembl - ENSG00000166123
  
Related genetic diseases (OMIM): 616281 - Mental retardation, autosomal recessive 49, 616281
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gpt2ENSDARG00000012199Danio rerio
 GPT2ENSGALG00000033338Gallus gallus
 Gpt2ENSMUSG00000031700Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
GPT / P24298 / glutamic--pyruvic transaminaseENSG0000016770163


Protein motifs (from Interpro)
Interpro ID Name
 IPR004839  Aminotransferase, class I/classII
 IPR015421  Pyridoxal phosphate-dependent transferase, major domain
 IPR015422  Pyridoxal phosphate-dependent transferase domain 1
 IPR015424  Pyridoxal phosphate-dependent transferase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006103 2-oxoglutarate metabolic process IDA
 biological_processGO:0008652 cellular amino acid biosynthetic process TAS
 biological_processGO:0009058 biosynthetic process IEA
 biological_processGO:0042851 L-alanine metabolic process IDA
 biological_processGO:0042853 L-alanine catabolic process IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0005759 mitochondrial matrix TAS
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0004021 L-alanine:2-oxoglutarate aminotransferase activity EXP
 molecular_functionGO:0008483 transaminase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0030170 pyridoxal phosphate binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0001249 Mental retardation 
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 HP:0001260 Dysarthria "Dysarthric speech is a general description referring to a neurological speech disorder characterized by poor articulation. Depending on the involved neurological structures, dysarthria may be further classified as spastic, flaccid, ataxic, hyperkinetic and hypokinetic, or mixed." [HPO:curators]
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0001290 Generalized hypotonia "Generalized muscular hypotonia (abnormally low muscle tone)." [HPO:curators]
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 HP:0001298 Encephalopathy 
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 HP:0001344 Absent speech development 
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 HP:0001347 Hyperreflexia "The presence of overactive or overresponsive reflexes." [HPO:curators]
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 HP:0001508 Failure to thrive 
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 HP:0002069 Generalized tonic-clonic seizures "Generalized tonic-clonic seizures are `generalized seizures` (HP:0002197) in which the patient suddenly loses conciousness, the eyes roll back, and the entire body musculature undergoes tonic contractions. In the clonic phase of the seizure, there are rhythmic contractions of the musculature alternating with relaxation of all muscle groups. Loss of sphincter control during the seizure is common. This form of seizure was formerly commonly called grand mal seizure." [HPO:curators]
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 HP:0002079 Hypoplasia of the corpus callosum "Underdevelopment of the corpus callosum." [HPO:curators]
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 HP:0002307 Drooling 
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 HP:0003676 Progressive disorder 
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 HP:0005484 Microcephaly, postnatal 
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSG00000166123 GPT2 / Q8TD30 / glutamic--pyruvic transaminase 2  / complex






 

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contact: otassy@igbmc.fr