ENSG00000169733


Homo sapiens

Features
Gene ID: ENSG00000169733
  
Biological name :RFNG
  
Synonyms : Q9Y644 / RFNG / RFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: -1
Band: q25.3
Gene start: 82047902
Gene end: 82051831
  
Corresponding Affymetrix probe sets: 212968_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000307971
Ensembl peptide - ENSP00000402931
Ensembl peptide - ENSP00000463623
NCBI entrez gene - 5986     See in Manteia.
OMIM - 602578
RefSeq - XM_011523587
RefSeq - NM_002917
RefSeq Peptide - NP_002908
swissprot - F5H3H7
swissprot - Q9Y644
swissprot - J3QLN0
Ensembl - ENSG00000169733
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rfngENSDARG00000019746Danio rerio
 RFNGENSGALG00000002841Gallus gallus
 RfngENSMUSG00000025158Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LFNG / Q8NES3 / LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferaseENSG0000010600358
MFNG / O00587 / MFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferaseENSG0000010006051


Protein motifs (from Interpro)
Interpro ID Name
 IPR003378  Fringe-like
 IPR017374  Fringe


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007389 pattern specification process IEA
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0008593 regulation of Notch signaling pathway IEA
 biological_processGO:0009887 animal organ morphogenesis NAS
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0032092 positive regulation of protein binding IEA
 biological_processGO:0036066 protein O-linked fucosylation IEA
 biological_processGO:0045747 positive regulation of Notch signaling pathway IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005576 extracellular region NAS
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030173 integral component of Golgi membrane IEA
 cellular_componentGO:0070062 extracellular exosome HDA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0016757 transferase activity, transferring glycosyl groups IEA
 molecular_functionGO:0033829 O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Pre-NOTCH Processing in Golgi


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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