ENSG00000170185


Homo sapiens

Features
Gene ID: ENSG00000170185
  
Biological name :USP38
  
Synonyms : Q8NB14 / ubiquitin specific peptidase 38 / USP38
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: q31.21
Gene start: 143184917
Gene end: 143223830
  
Corresponding Affymetrix probe sets: 223288_at (Human Genome U133 Plus 2.0 Array)   223289_s_at (Human Genome U133 Plus 2.0 Array)   241375_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000303434
Ensembl peptide - ENSP00000424158
Ensembl peptide - ENSP00000427647
NCBI entrez gene - 84640     See in Manteia.
RefSeq - XM_011532360
RefSeq - NM_001290325
RefSeq - NM_001290326
RefSeq - NM_032557
RefSeq Peptide - NP_001277254
RefSeq Peptide - NP_001277255
RefSeq Peptide - NP_115946
swissprot - Q8NB14
swissprot - H0Y9H5
Ensembl - ENSG00000170185
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 usp38ENSDARG00000075798Danio rerio
 USP38ENSGALG00000009886Gallus gallus
 Usp38ENSMUSG00000038250Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
USP35 / Q9P2H5 / ubiquitin specific peptidase 35ENSG0000011836943
USP12 / O75317 / ubiquitin specific peptidase 12ENSG0000015248411
USP46 / P62068 / ubiquitin specific peptidase 46ENSG0000010918911


Protein motifs (from Interpro)
Interpro ID Name
 IPR001394  Peptidase C19, ubiquitin carboxyl-terminal hydrolase
 IPR018200  Ubiquitin specific protease, conserved site
 IPR028889  Ubiquitin specific protease domain
 IPR033840  Ubiquitin-specific peptidase 38


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0006511 ubiquitin-dependent protein catabolic process IEA
 biological_processGO:0016579 protein deubiquitination IDA
 molecular_functionGO:0004843 thiol-dependent ubiquitin-specific protease activity IDA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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