ENSG00000170379


Homo sapiens

Features
Gene ID: ENSG00000170379
  
Biological name :TCAF2
  
Synonyms : A6NFQ2 / TCAF2 / TRPM8 channel associated factor 2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: 1
Band: q35
Gene start: 143620952
Gene end: 143730409
  
Corresponding Affymetrix probe sets: 1564027_a_at (Human Genome U133 Plus 2.0 Array)   1564028_s_at (Human Genome U133 Plus 2.0 Array)   239315_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000441099
Ensembl peptide - ENSP00000431079
Ensembl peptide - ENSP00000495809
Ensembl peptide - ENSP00000349902
Ensembl peptide - ENSP00000389100
Ensembl peptide - ENSP00000404265
Ensembl peptide - ENSP00000412724
NCBI entrez gene - 285966     See in Manteia.
OMIM - 616252
RefSeq - XM_011516059
RefSeq - NM_001130025
RefSeq - NM_001130026
RefSeq - NM_173678
RefSeq - XM_006715927
RefSeq - XM_006715928
RefSeq Peptide - NP_001123498
RefSeq Peptide - NP_775949
RefSeq Peptide - NP_001123497
swissprot - H0YC74
swissprot - Q8N1I1
swissprot - A6NFQ2
Ensembl - ENSG00000170379
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CR925813.1ENSDARG00000098171Danio rerio
 si:ch211-210b2.2ENSDARG00000009402Danio rerio
 si:ch211-210b2.3ENSDARG00000095212Danio rerio
 si:ch211-210b2.3ENSDARG00000096927Danio rerio
 Tcaf2ENSMUSG00000029851Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
TCAF2C / TRPM8 channel associated factor 2CENSG0000028352874
TCAF1 / Q9Y4C2 / TRPM8 channel associated factor 1ENSG0000019842064


Protein motifs (from Interpro)
Interpro ID Name
 IPR029062  Class I glutamine amidotransferase-like
 IPR031161  Peptidase family M60 domain
 IPR035423  M60-like domain, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0010360 negative regulation of anion channel activity IDA
 biological_processGO:0030335 positive regulation of cell migration IDA
 biological_processGO:0090314 positive regulation of protein targeting to membrane IMP
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030054 cell junction IDA
 molecular_functionGO:0044325 ion channel binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr