ENSDARG00000098171


Danio rerio

Features
Gene ID: ENSDARG00000098171
  
Biological name :CR925813.1
  
Synonyms : CR925813.1
  
Possible biological names infered from orthology : A6NFQ2 / Mus musculus TRPM8 channel-associated factor 1 (Tcaf1), transcript variant 2, mRNA. / Q6QR59 / Q8BNE1 / Q921K8 / Q9Y4C2 / TCAF1 / TCAF2 / TCAF2C / Tcaf3 / TRPM8 channel associated factor 1 / TRPM8 channel associated factor 2 / TRPM8 channel associated factor 2C / TRPM8 channel-associated factor 3
  
Species: Danio rerio
  
Chr. number: 15
Strand: -1
Band:
Gene start: 14203675
Gene end: 14212777
  
Corresponding Affymetrix probe sets: Dr.4313.1.A1_at (Zebrafish Array)   Dr.8643.1.A1_x_at (Zebrafish Array)   
  
Cross references: Ensembl peptide - ENSDARP00000140187
Ensembl peptide - ENSDARP00000144022
NCBI entrez gene - 323315     See in Manteia.
swissprot - F1QL62
Ensembl - ENSDARG00000098171
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 TCAF1ENSG00000198420Homo sapiens
 TCAF2ENSG00000170379Homo sapiens
 TCAF2CENSG00000283528Homo sapiens
 Tcaf1ENSMUSG00000036667Mus musculus
 Tcaf2ENSMUSG00000029851Mus musculus
 Tcaf3ENSMUSG00000018656Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
si:ch211-210b2.3 / Tcaf3* / TCAF1* / TCAF2* / TCAF2C* / A6NFQ2* / Q6QR59* / Q8BNE1* / Q921K8* / Q9Y4C2* / TRPM8 channel associated factor 1* / TRPM8 channel associated factor 2* / TRPM8 cha...ENSDARG0000009692777
si:ch211-210b2.3 / si:ch211-210b2.4 / Tcaf3* / TCAF1* / TCAF2* / A6NFQ2* / Q6QR59* / Q8BNE1* / Q921K8* / Q9Y4C2* / TCAF2C* / TRPM8 channel associated factor 1* / TRPM8 channel associated fa...ENSDARG0000009521277
si:ch211-210b2.2 / Tcaf3* / TCAF1* / TCAF2* / TCAF2C* / A6NFQ2* / Q6QR59* / Q8BNE1* / Q921K8* / Q9Y4C2* / TRPM8 channel associated factor 1* / TRPM8 channel associated factor 2* / TRPM8 cha...ENSDARG0000000940277


Protein motifs (from Interpro)
Interpro ID Name
 IPR029062  Class I glutamine amidotransferase-like
 IPR031161  Peptidase family M60 domain
 IPR035423  M60-like domain, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
No match


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr