ENSMUSG00000029851


Mus musculus

Features
Gene ID: ENSMUSG00000029851
  
Biological name :Tcaf2
  
Synonyms : Q921K8 / Tcaf2 / TRPM8 channel-associated factor 2
  
Possible biological names infered from orthology : A6NFQ2 / TCAF2C / TRPM8 channel associated factor 2C
  
Species: Mus musculus
  
Chr. number: 6
Strand: -1
Band: B2.1
Gene start: 42623016
Gene end: 42645254
  
Corresponding Affymetrix probe sets: 10544452 (MoGene1.0st)   1424761_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000031879
NCBI entrez gene - 232748     See in Manteia.
MGI - MGI:2385258
RefSeq - NM_146174
RefSeq Peptide - NP_666286
swissprot - Q921K8
Ensembl - ENSMUSG00000029851
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 CR925813.1ENSDARG00000098171Danio rerio
 si:ch211-210b2.2ENSDARG00000009402Danio rerio
 si:ch211-210b2.3ENSDARG00000095212Danio rerio
 si:ch211-210b2.3ENSDARG00000096927Danio rerio
 TCAF2ENSG00000170379Homo sapiens
 TCAF2CENSG00000283528Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tcaf1 / Q8BNE1 / Mus musculus TRPM8 channel-associated factor 1 (Tcaf1), transcript variant 2, mRNA. / Q9Y4C2* / TRPM8 channel associated factor 1*ENSMUSG0000003666760
Tcaf3 / Q6QR59 / TRPM8 channel-associated factor 3 ENSMUSG0000001865657


Protein motifs (from Interpro)
Interpro ID Name
 IPR029062  Class I glutamine amidotransferase-like
 IPR031161  Peptidase family M60 domain
 IPR035423  M60-like domain, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002244 hematopoietic progenitor cell differentiation IGI
 biological_processGO:0010360 negative regulation of anion channel activity ISO
 biological_processGO:0030335 positive regulation of cell migration ISO
 biological_processGO:0090314 positive regulation of protein targeting to membrane ISO
 cellular_componentGO:0005886 plasma membrane ISO
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0030054 cell junction ISO
 molecular_functionGO:0044325 ion channel binding ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr