ENSG00000171916


Homo sapiens

Features
Gene ID: ENSG00000171916
  
Biological name :LGALS9C
  
Synonyms : galectin 9C / LGALS9C / Q6DKI2
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 17
Strand: 1
Band: p11.2
Gene start: 18476737
Gene end: 18494945
  
Corresponding Affymetrix probe sets:
  
Cross references: Ensembl peptide - ENSP00000464682
Ensembl peptide - ENSP00000329932
Ensembl peptide - ENSP00000461967
Ensembl peptide - ENSP00000462660
Ensembl peptide - ENSP00000462708
Ensembl peptide - ENSP00000462760
Ensembl peptide - ENSP00000462967
Ensembl peptide - ENSP00000463209
Ensembl peptide - ENSP00000464108
NCBI entrez gene - 654346     See in Manteia.
RefSeq - XM_011523997
RefSeq - NM_001040078
RefSeq - XM_005256769
RefSeq - XM_005256770
RefSeq - XM_011523993
RefSeq - XM_011523994
RefSeq - XM_011523995
RefSeq - XM_011523996
RefSeq Peptide - NP_001035167
swissprot - Q6DKI2
swissprot - J3KSV0
swissprot - J3KSY2
swissprot - J3KT17
swissprot - J3QKS2
swissprot - J3QR96
swissprot - J3QSH0
swissprot - J3KRF0
Ensembl - ENSG00000171916
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lgals9l1ENSDARG00000025903Danio rerio
 lgals9l3ENSDARG00000041060Danio rerio
 lgals9l4ENSDARG00000069058Danio rerio
 lgals9l5ENSDARG00000087311Danio rerio
 lgals9l6ENSDARG00000093059Danio rerio
 Lgals9ENSMUSG00000001123Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q3B8N2 / LGALS9B / galectin 9BENSG0000017029899
LGALS9 / O00182 / galectin 9ENSG0000016896194
LGALS4 / P56470 / galectin 4ENSG0000017174736
LGALS8 / O00214 / galectin 8ENSG0000011697732
Q96DT0 / LGALS12 / galectin 12ENSG0000013331727
LGALS3 / P17931 / galectin 3ENSG0000013198122
P47929 / LGALS7B / galectin 7BENSG0000017893414
LGALSL / Q3ZCW2 / galectin likeENSG0000011986214
LGALS7 / P47929 / galectin 7ENSG0000020507614
A4D1Z8 / GRIFIN / galectin-related inter-fiber proteinENSG0000027557211


Protein motifs (from Interpro)
Interpro ID Name
 IPR001079  Galectin, carbohydrate recognition domain
 IPR013320  Concanavalin A-like lectin/glucanase domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0030246 carbohydrate binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr