ENSG00000173166


Homo sapiens

Features
Gene ID: ENSG00000173166
  
Biological name :RAPH1
  
Synonyms : Q70E73 / RAPH1 / Ras association (RalGDS/AF-6) and pleckstrin homology domains 1
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 2
Strand: -1
Band: q33.2
Gene start: 203394345
Gene end: 203535410
  
Corresponding Affymetrix probe sets: 1552482_at (Human Genome U133 Plus 2.0 Array)   225186_at (Human Genome U133 Plus 2.0 Array)   225188_at (Human Genome U133 Plus 2.0 Array)   225189_s_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000397751
Ensembl peptide - ENSP00000406662
Ensembl peptide - ENSP00000486548
Ensembl peptide - ENSP00000414430
Ensembl peptide - ENSP00000412241
Ensembl peptide - ENSP00000411138
Ensembl peptide - ENSP00000311293
Ensembl peptide - ENSP00000316543
Ensembl peptide - ENSP00000363617
Ensembl peptide - ENSP00000390578
Ensembl peptide - ENSP00000392854
Ensembl peptide - ENSP00000396711
NCBI entrez gene - 65059     See in Manteia.
OMIM - 609035
RefSeq - XM_005246779
RefSeq - XM_011511646
RefSeq - XM_011511647
RefSeq - XM_011511648
RefSeq - XM_011511649
RefSeq - NM_213589
RefSeq - XM_005246777
RefSeq - XM_006712695
RefSeq - NM_203365
RefSeq Peptide - NP_976241
RefSeq Peptide - NP_998754
swissprot - Q70E73
swissprot - C9JLG4
swissprot - C9J164
swissprot - C9J0R8
swissprot - C9K0J5
Ensembl - ENSG00000173166
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 raph1aENSDARG00000006301Danio rerio
 raph1bENSDARG00000061732Danio rerio
 ENSGALG00000031688Gallus gallus
 Raph1ENSMUSG00000026014Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q7Z5R6 / APBB1IP / amyloid beta precursor protein binding family B member 1 interacting proteinENSG0000007742026
GRB14 / Q14449 / growth factor receptor bound protein 14ENSG0000011529011
GRB10 / Q13322 / growth factor receptor bound protein 10ENSG0000010607011
GRB7 / Q14451 / growth factor receptor bound protein 7ENSG0000014173810


Protein motifs (from Interpro)
Interpro ID Name
 IPR000159  Ras-associating (RA) domain
 IPR001849  Pleckstrin homology domain
 IPR011993  PH-like domain superfamily
 IPR029071  Ubiquitin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0048675 axon extension IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016604 nuclear body IDA
 cellular_componentGO:0030027 lamellipodium IEA
 cellular_componentGO:0030175 filopodium IEA
 cellular_componentGO:0031252 cell leading edge IEA
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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