ENSG00000173809


Homo sapiens

Features
Gene ID: ENSG00000173809
  
Biological name :TDRD12
  
Synonyms : Q587J7 / TDRD12 / tudor domain containing 12
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 19
Strand: 1
Band: q13.11
Gene start: 32719753
Gene end: 32829580
  
Corresponding Affymetrix probe sets: 215356_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000390621
Ensembl peptide - ENSP00000489971
Ensembl peptide - ENSP00000496698
Ensembl peptide - ENSP00000492643
Ensembl peptide - ENSP00000416248
Ensembl peptide - ENSP00000457498
NCBI entrez gene - 91646     See in Manteia.
RefSeq - XM_017027459
RefSeq - XM_011527473
RefSeq - XM_011527474
RefSeq - XM_011527475
RefSeq - XM_011527476
RefSeq - XM_017027458
RefSeq - NM_001110822
RefSeq - XM_011527471
RefSeq - XM_011527472
RefSeq Peptide - NP_001104292
swissprot - A0A1W2PRK2
swissprot - H3BU70
swissprot - A0A1B0GU57
swissprot - Q587J7
Ensembl - ENSG00000173809
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tdrd12ENSDARG00000075217Danio rerio
 ENSGALG00000004704Gallus gallus
 Q9CWU0ENSMUSG00000030491Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR002999  Tudor domain
 IPR007052  CS domain
 IPR008978  HSP20-like chaperone
 IPR011545  DEAD/DEAH box helicase domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR035437  SNase-like, OB-fold superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007140 male meiotic nuclear division IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007283 spermatogenesis ISS
 biological_processGO:0009566 fertilization IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0031047 gene silencing by RNA ISS
 biological_processGO:0034587 piRNA metabolic process IEA
 biological_processGO:0043046 DNA methylation involved in gamete generation IEA
 biological_processGO:0051321 meiotic cell cycle IEA
 biological_processGO:1903955 positive regulation of protein targeting to mitochondrion IMP
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:1990923 PET complex IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0004386 helicase activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016787 hydrolase activity IEA


Pathways (from Reactome)
Pathway description
PIWI-interacting RNA (piRNA) biogenesis


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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