ENSGALG00000004704


Gallus gallus

Features
Gene ID: ENSGALG00000004704
  
Biological name :
  
Synonyms :
  
Possible biological names infered from orthology : Putative ATP-dependent RNA helicase TDRD12 / Q587J7 / Q9CWU0 / TDRD12 / tudor domain containing 12
  
Species: Gallus gallus
  
Chr. number: 11
Strand: 1
Band:
Gene start: 10050576
Gene end: 10078937
  
Corresponding Affymetrix probe sets: GgaAffx.2920.1.S1_at (Chicken Array)   GgaAffx.2922.1.S1_at (Chicken Array)   
  
Cross references: Ensembl peptide - ENSGALP00000007480
Ensembl peptide - ENSGALP00000055450
Ensembl peptide - ENSGALP00000051317
NCBI entrez gene - 768954     See in Manteia.
RefSeq - XM_015292476
RefSeq - XM_015292477
swissprot - A0A1D5PRC6
swissprot - A0A1D5PEV7
swissprot - F1NIG5
Ensembl - ENSGALG00000004704
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tdrd12ENSDARG00000075217Danio rerio
 Q587J7ENSG00000173809Homo sapiens
 Q9CWU0ENSMUSG00000030491Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000571  Zinc finger, CCCH-type
 IPR001650  Helicase, C-terminal
 IPR002999  Tudor domain
 IPR007052  CS domain
 IPR008978  HSP20-like chaperone
 IPR011545  DEAD/DEAH box helicase domain
 IPR027417  P-loop containing nucleoside triphosphate hydrolase


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006364 rRNA processing IBA
 biological_processGO:0010501 RNA secondary structure unwinding IBA
 cellular_componentGO:0005730 nucleolus IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0004004 ATP-dependent RNA helicase activity IBA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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