ENSG00000174428


Homo sapiens

Features
Gene ID: ENSG00000174428
  
Biological name :GTF2IRD2B
  
Synonyms : GTF2IRD2B / GTF2I repeat domain containing 2B / Q6EKJ0
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: 1
Band: q11.23
Gene start: 75092573
Gene end: 75149817
  
Corresponding Affymetrix probe sets: 1557289_s_at (Human Genome U133 Plus 2.0 Array)   215569_at (Human Genome U133 Plus 2.0 Array)   228765_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000480037
Ensembl peptide - ENSP00000486360
Ensembl peptide - ENSP00000481706
Ensembl peptide - ENSP00000480524
Ensembl peptide - ENSP00000411454
NCBI entrez gene - 389524     See in Manteia.
OMIM - 608900
RefSeq - NM_001003795
RefSeq Peptide - NP_001003795
swissprot - A0A0D9SF80
swissprot - A0A087WW90
swissprot - Q6EKJ0
Ensembl - ENSG00000174428
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q99NI3ENSMUSG00000015942Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q86UP8 / GTF2IRD2 / GTF2I repeat domain containing 2ENSG0000019627599
ZBED9 / Q6R2W3 / zinc finger BED-type containing 9ENSG0000023204017
Q7L775 / EPM2AIP1 / EPM2A interacting protein 1ENSG0000017856716
P0CF97 / FAM200B / family with sequence similarity 200 member BENSG0000023776514
ZBED5 / Q49AG3 / zinc finger BED-type containing 5ENSG0000023628714
ZBED8 / Q8IZ13 / zinc finger BED-type containing 8ENSG0000022188612
Q8TCP9 / FAM200A / family with sequence similarity 200 member AENSG0000022190912
KRBA2 / Q6ZNG9 / KRAB-A domain containing 2ENSG000001846193


Protein motifs (from Interpro)
Interpro ID Name
 IPR004212  GTF2I-like repeat
 IPR012337  Ribonuclease H-like superfamily
 IPR036647  GTF2I-like repeat superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0007275 multicellular organism development IBA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr