ENSG00000221909


Homo sapiens

Features
Gene ID: ENSG00000221909
  
Biological name :FAM200A
  
Synonyms : FAM200A / family with sequence similarity 200 member A / Q8TCP9
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 7
Strand: -1
Band: q22.1
Gene start: 99546308
Gene end: 99558536
  
Corresponding Affymetrix probe sets: 1566865_at (Human Genome U133 Plus 2.0 Array)   238609_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000386191
Ensembl peptide - ENSP00000411372
NCBI entrez gene - 221786     See in Manteia.
RefSeq - XM_011515913
RefSeq - NM_145111
RefSeq - XM_011515911
RefSeq Peptide - NP_659802
swissprot - Q8TCP9
swissprot - J3QT35
Ensembl - ENSG00000221909
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P0CF97 / FAM200B / family with sequence similarity 200 member BENSG0000023776576
ZBED9 / Q6R2W3 / zinc finger BED-type containing 9ENSG0000023204038
ZBED5 / Q49AG3 / zinc finger BED-type containing 5ENSG0000023628733
ZBED8 / Q8IZ13 / zinc finger BED-type containing 8ENSG0000022188630
Q86UP8 / GTF2IRD2 / GTF2I repeat domain containing 2ENSG0000019627520
Q6EKJ0 / GTF2IRD2B / GTF2I repeat domain containing 2BENSG0000017442820
Q7L775 / EPM2AIP1 / EPM2A interacting protein 1ENSG0000017856720
KRBA2 / Q6ZNG9 / KRAB-A domain containing 2ENSG000001846192


Protein motifs (from Interpro)
Interpro ID Name
 IPR012337  Ribonuclease H-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005654 nucleoplasm IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IBA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr