ENSG00000236287


Homo sapiens

Features
Gene ID: ENSG00000236287
  
Biological name :ZBED5
  
Synonyms : Q49AG3 / ZBED5 / zinc finger BED-type containing 5
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 11
Strand: -1
Band: p15.4
Gene start: 10812074
Gene end: 10858796
  
Corresponding Affymetrix probe sets: 218263_s_at (Human Genome U133 Plus 2.0 Array)   240381_at (Human Genome U133 Plus 2.0 Array)   242552_x_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000398106
Ensembl peptide - ENSP00000435663
Ensembl peptide - ENSP00000435491
Ensembl peptide - ENSP00000433093
Ensembl peptide - ENSP00000432764
Ensembl peptide - ENSP00000415939
NCBI entrez gene - 58486     See in Manteia.
OMIM - 615251
RefSeq - NM_001143667
RefSeq - NM_021211
RefSeq Peptide - NP_001137139
RefSeq Peptide - NP_067034
swissprot - Q49AG3
swissprot - E9PM71
swissprot - E9PJT5
swissprot - E9PJ57
swissprot - E9PNT1
Ensembl - ENSG00000236287
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
ZBED9 / Q6R2W3 / zinc finger BED-type containing 9ENSG0000023204035
P0CF97 / FAM200B / family with sequence similarity 200 member BENSG0000023776529
Q8TCP9 / FAM200A / family with sequence similarity 200 member AENSG0000022190928
ZBED8 / Q8IZ13 / zinc finger BED-type containing 8ENSG0000022188627
Q6EKJ0 / GTF2IRD2B / GTF2I repeat domain containing 2BENSG0000017442819
Q86UP8 / GTF2IRD2 / GTF2I repeat domain containing 2ENSG0000019627519
Q7L775 / EPM2AIP1 / EPM2A interacting protein 1ENSG0000017856717
KRBA2 / Q6ZNG9 / KRAB-A domain containing 2ENSG000001846194


Protein motifs (from Interpro)
Interpro ID Name
 IPR003656  Zinc finger, BED-type
 IPR012337  Ribonuclease H-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 cellular_componentGO:0005654 nucleoplasm IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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