ENSG00000232040


Homo sapiens

Features
Gene ID: ENSG00000232040
  
Biological name :ZBED9
  
Synonyms : Q6R2W3 / ZBED9 / zinc finger BED-type containing 9
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 6
Strand: -1
Band: p22.1
Gene start: 28570535
Gene end: 28616212
  
Corresponding Affymetrix probe sets: 244758_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000494942
Ensembl peptide - ENSP00000395259
NCBI entrez gene - 114821     See in Manteia.
OMIM - 615254
RefSeq - XM_017010231
RefSeq - NM_052923
RefSeq - XM_011514285
RefSeq - XM_011514286
RefSeq - XM_011514287
RefSeq - XM_011514288
RefSeq - XM_011514283
RefSeq - XM_011514284
RefSeq Peptide - NP_001316545
RefSeq Peptide - NP_443155
swissprot - Q6R2W3
swissprot - A0A1U9X8W9
Ensembl - ENSG00000232040
  
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
KRBA2 / Q6ZNG9 / KRAB-A domain containing 2ENSG0000018461919
ZBED5 / Q49AG3 / zinc finger BED-type containing 5ENSG0000023628718
P0CF97 / FAM200B / family with sequence similarity 200 member BENSG0000023776518
Q8TCP9 / FAM200A / family with sequence similarity 200 member AENSG0000022190916
ZBED8 / Q8IZ13 / zinc finger BED-type containing 8ENSG0000022188614
Q86UP8 / GTF2IRD2 / GTF2I repeat domain containing 2ENSG0000019627512
Q6EKJ0 / GTF2IRD2B / GTF2I repeat domain containing 2BENSG0000017442812
Q7L775 / EPM2AIP1 / EPM2A interacting protein 1ENSG000001785679


Protein motifs (from Interpro)
Interpro ID Name
 IPR001584  Integrase, catalytic core
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR012337  Ribonuclease H-like superfamily
 IPR036397  Ribonuclease H superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0015074 DNA integration IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IBA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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