ENSG00000174720


Homo sapiens

Features
Gene ID: ENSG00000174720
  
Biological name :LARP7
  
Synonyms : La ribonucleoprotein domain family member 7 / LARP7 / Q4G0J3
  
Possible biological names infered from orthology :
  
Species: Homo sapiens
  
Chr. number: 4
Strand: 1
Band: q25
Gene start: 112636964
Gene end: 112657592
  
Corresponding Affymetrix probe sets: 212785_s_at (Human Genome U133 Plus 2.0 Array)   215246_at (Human Genome U133 Plus 2.0 Array)   241385_at (Human Genome U133 Plus 2.0 Array)   
  
Cross references: Ensembl peptide - ENSP00000421963
Ensembl peptide - ENSP00000426709
Ensembl peptide - ENSP00000426646
Ensembl peptide - ENSP00000426376
Ensembl peptide - ENSP00000424116
Ensembl peptide - ENSP00000422626
Ensembl peptide - ENSP00000422451
Ensembl peptide - ENSP00000422013
Ensembl peptide - ENSP00000314311
Ensembl peptide - ENSP00000344950
Ensembl peptide - ENSP00000421541
NCBI entrez gene - 51574     See in Manteia.
OMIM - 612026
RefSeq - NM_015454
RefSeq - NM_016648
RefSeq - NM_001267039
RefSeq Peptide - NP_001253968
RefSeq Peptide - NP_056269
RefSeq Peptide - NP_057732
swissprot - D6RFF0
swissprot - Q4G0J3
swissprot - D6RF49
swissprot - D6RF22
swissprot - D6RBH8
swissprot - D6RAF3
swissprot - D6R9Z6
swissprot - H0YA82
Ensembl - ENSG00000174720
  
Related genetic diseases (OMIM): 615071 - Alazami syndrome, 615071
See expression report in BioGPS
See gene description in Wikigenes
See gene description in GeneCards
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 larp7ENSDARG00000017315Danio rerio
 LARP7ENSGALG00000012048Gallus gallus
 Gm12666ENSMUSG00000066107Mus musculus
 Larp7ENSMUSG00000027968Mus musculus


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
LARP6 / Q9BRS8 / La ribonucleoprotein domain family member 6ENSG0000016617315


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR002344  Lupus La protein
 IPR006630  La-type HTH domain
 IPR014886  La protein, RNA-binding domain
 IPR034887  LARP7, RNA recognition motif 1
 IPR034910  LARP7, RNA recognition motif 2
 IPR034946  La-related protein 7, La domain
 IPR035979  RNA-binding domain superfamily
 IPR036388  Winged helix-like DNA-binding domain superfamily
 IPR036390  Winged helix DNA-binding domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006396 RNA processing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IDA
 cellular_componentGO:0005829 cytosol IDA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 HP:0000007 Autosomal recessive inheritance "A mode of inheritance that is observed for traits related to a gene encoded on one of the autosomes (i.e., the human chromosomes 1-22) in which a trait manifests in homozygotes. In the context of medical genetics, autosomal recessive disorders manifest in homozygotes (with two copies of the mutant allele) or compound heterozygotes (whereby each copy of a gene has a distinct mutant allele)." [HPO:curators]
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 HP:0000154 Wide mouth "Abnormally wide mouth." [HPO:curators]
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 HP:0000252 Microcephaly "Microcephaly is a neurodevelopmental disorder in which the circumference of the head is more than two standard deviations smaller than the age- and gender-dependent norm." [HPO:curators]
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 HP:0000272 Malar hypoplasia "Underdeveloped midface region." [HPO:curators]
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 HP:0000322 Short philtrum 
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 HP:0000369 Low-set ears "Low-set ears are defined to be set below an arbitrary line drawn between the lateral canthus of the eye and the occipital protruberance." [HPO:curators]
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 HP:0000431 Broad nasal bridge "Increased horizontal dimension of the upper, bony part of the nose." [HPO:curators]
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 HP:0000445 Broad nose 
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 HP:0000490 Deep set eyes 
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 HP:0001263 Developmental retardation "A delay in the achievement of motor or mental milestones manifested prior to age 18 and generally associated with lifelong mental and/or physical impairments." [HPO:curators]
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 HP:0002650 Scoliosis "The presence of an abnormal lateral curvature of the spine." [HPO:curators]
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 HP:0003510 Short stature, severe "A severe degree of short stature." [HPO:curators]
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 HP:0004325 Decreased body weight 
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 HP:0005280 Depressed nasal root and bridge 
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 HP:0010864 Mental retardation, severe "Moderate mental retardation is defined as an intelligence quotient (IQ) in the range of 20-34." [HPO:probinson]
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 HP:0012471 Thick vermilion border "Increased width of the "skin of vermilion border region of upper lip" (FMA:312645)." [HPO:probinson]
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Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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